G287543


Basic Information

Item Value
gene id G287543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66086357 ~ 66086583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU326001
actgTAGCTAAGatagggagaagtctgtccataataaagtgctactctaccttcttaacagcactatcaacaaggcagatcccacaggctctagttttgtcgcacctggactactgttcagtcgtgaggtcaggtgccacaaagaggtacttaggaaaattgcaattggctcagaacagggcagcacggctggcccttggatgtacacagagagctaacattaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326001 True 227 lncRNA 0.46 1 66086357 66086583

Neighbor

gene id symbol gene type direction distance location
LOC118964312 LOC106586611 coding upstream 50058 66027633 ~ 66036299 (+)
LOC110520417 gdap2 coding upstream 272862 65777196 ~ 65813495 (+)
LOC110520416 tbx15 coding upstream 449271 65614185 ~ 65637086 (+)
wars2 wars2 coding upstream 486494 65583035 ~ 65599863 (+)
popdc2 popdc2 coding upstream 582566 65491959 ~ 65503791 (+)
LOC110504495 LOC106586612 coding downstream 21284 66107867 ~ 66161419 (+)
LOC110520426 LOC106582091 coding downstream 122530 66209113 ~ 66268815 (+)
LOC110520428 NA coding downstream 141816 66228399 ~ 66232190 (+)
LOC110504505 LOC106586617 coding downstream 283474 66370057 ~ 66387340 (+)
LOC110520430 mspd2 coding downstream 325870 66412453 ~ 66434626 (+)
G287534 NA non-coding upstream 16714 66069328 ~ 66069643 (+)
G287531 NA non-coding upstream 22226 66063824 ~ 66064131 (+)
G287530 rnf17 non-coding upstream 22990 66063133 ~ 66063367 (+)
G287513 ttf2 non-coding upstream 61390 66024443 ~ 66024967 (+)
G287546 NA non-coding downstream 4064 66090647 ~ 66090980 (+)
G287817 NA non-coding downstream 149512 66236095 ~ 66243001 (+)
G287818 NA non-coding downstream 151051 66237634 ~ 66244230 (+)
G287831 NA non-coding downstream 175121 66261704 ~ 66262108 (+)
zmym2 LOC106586592 other upstream 800801 65260200 ~ 65311166 (+)
LOC110520396 LOC100136409 other upstream 919777 65161342 ~ 65166580 (+)
G286679 NA other upstream 976720 65109256 ~ 65109637 (+)
G285763 NA other upstream 1778997 64306512 ~ 64307360 (+)
G288252 NA other downstream 463239 66549822 ~ 66550487 (+)
G288430 NA other downstream 644703 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 696790 66783373 ~ 66787442 (+)
G288674 NA other downstream 906588 66993171 ~ 66994131 (+)
LOC110520448 LOC106586634 other downstream 1311374 67397151 ~ 67409646 (+)

Expression


Co-expression Network