XLOC_022226



Basic Information


Item Value
gene id XLOC_022226
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 16516982 ~ 16518846 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044722
GCAAACCCCCTCACGGCTCAGACTCCCGTTGGAGTAAATATGAGCTTCAGCTCTCGCAGAGCTTAACATGACCCTCTTTCTGTTCCCCCTGCCAGCATTGAGTTCCTCTGCTGTTTCCTCCTAGTTCTTTACTCCCTGCCTTTGACTCTCATGTAATCTCCTTGCTACATCagcatcaccctaagctcagatTTCGCAGGGGTCAACATGAGCTTTGGCTCTGACAAGAGCCTACCCTATCACCCTCTCCTTTCTGTTCCCCCCTGCCAGCGTTGAGTAATTCCGctgttccctcctagctctttaccCCTTGCCCATTTCTTTTCCCATTCCAGTGTGGAGTGCTTCCGCTGCaccagtttatttgttttccatatagTTATTGATAAAATGTCTACATTGTGTTCATTCTGCATAGTAGTCCATTTATATTTCATGTATTATATTGTGTATTTCTGGATAATAATCATATTACTCCCAGCAGCTCTCCCCTTTCCACTTGCCAGAATTGAGTGCCTTACTGTTTTCTACCAGCTGTTTACTCATTGTTTTTGACTCCCATCCAACCTCCTTCCTCCACATTAACATCACCCTAAGCTCTGACTCCTGCCGGAGTCAATAGGAGTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044722 True 627 lncRNA 0.46 2 16516982 16518846

Neighbor


gene id symbol gene type direction distance location
XLOC_022225 si:dkeyp-100a5.4 coding downstream 31134 16479489 ~ 16485848 (-)
XLOC_022224 BX511184.1 coding downstream 565006 15946154 ~ 15951976 (-)
XLOC_022223 mrgbp coding downstream 600591 15899693 ~ 15916391 (-)
XLOC_022222 eef1a2 coding downstream 638103 15850938 ~ 15878879 (-)
XLOC_022221 NA coding downstream 752664 15696527 ~ 15764318 (-)
XLOC_022227 CR318668.1 coding upstream 42387 16561233 ~ 16562161 (-)
XLOC_022228 NA coding upstream 125278 16644124 ~ 16648039 (-)
XLOC_022229 sdcbp2 coding upstream 129775 16648621 ~ 16682186 (-)
XLOC_022230 fkbp1ab coding upstream 169574 16688420 ~ 16692312 (-)
XLOC_022231 NA coding upstream 174732 16693578 ~ 16709238 (-)
XLOC_022220 NA non-coding downstream 819933 15690531 ~ 15697049 (-)
XLOC_022219 NA non-coding downstream 953385 15432413 ~ 15563597 (-)
XLOC_022217 BX537335.1 non-coding downstream 1409020 15107848 ~ 15107962 (-)
XLOC_022233 AL732515.1 non-coding upstream 225936 16744782 ~ 16746423 (-)
XLOC_022235 NA non-coding upstream 331990 16850836 ~ 16852947 (-)

Expression



Co-expression Network