G288116



Basic Information


Item Value
gene id G288116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66335701 ~ 66335916 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU326639
gttccatagcctgcattcgctccatttaaagggatatcaaccagattcctttttctatcgcttcctcaaggtgtcaacagtcttcagacatagtttcaggcttttattttgaaaaatgagccagaaagataacatcgcgtcaggtggtcacatgagttttgctcgcgcaacagagttttgacagctattgtttttccctctcctactgataaagac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU326639 True 216 lncRNA 0.42 1 66335701 66335916

Neighbor


gene id symbol gene type direction distance location
LOC110520429 LOC106586615 coding downstream 39814 66268185 ~ 66295887 (-)
LOC110520425 LOC106582038 coding downstream 142214 66183116 ~ 66193487 (-)
rnf17 rnf17 coding downstream 265567 66036342 ~ 66070134 (-)
ttf2 ttf2 coding downstream 308100 66020033 ~ 66027601 (-)
LOC110520422 vtcn1 coding downstream 351576 65978825 ~ 65984444 (-)
LOC118964314 NA coding upstream 64151 66400067 ~ 66412373 (-)
LOC118944607 LOC106582097 coding upstream 136423 66472339 ~ 66475059 (-)
LOC110520431 LOC106586619 coding upstream 154552 66490468 ~ 66537895 (-)
LOC110504514 NA coding upstream 396321 66732237 ~ 66747293 (-)
rpe rpe coding upstream 684538 67020454 ~ 67023408 (-)
G287993 NA non-coding downstream 13105 66322367 ~ 66322596 (-)
G287992 NA non-coding downstream 13509 66321993 ~ 66322192 (-)
G287976 NA non-coding downstream 26391 66309078 ~ 66309310 (-)
G287970 NA non-coding downstream 34728 66300733 ~ 66300973 (-)
G287962 NA non-coding downstream 41226 66294225 ~ 66294475 (-)
G288172 mospd2 non-coding upstream 82902 66418818 ~ 66420930 (-)
G288230 NA non-coding upstream 191769 66527685 ~ 66532169 (-)
G288284 NA non-coding upstream 208751 66544667 ~ 66544890 (-)
G288286 NA non-coding upstream 213785 66549701 ~ 66550419 (-)
G288287 NA non-coding upstream 219270 66555186 ~ 66555423 (-)
G287112 NA other downstream 755206 65579791 ~ 65580495 (-)
G287042 NA other downstream 888418 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1035284 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1099793 65235180 ~ 65235908 (-)
G286638 NA other downstream 1259716 65054700 ~ 65075985 (-)
G288578 NA other upstream 506755 66842671 ~ 66842881 (-)
G289678 NA other upstream 1290916 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1547836 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1870674 68206330 ~ 68208674 (-)
G290542 NA other upstream 2243187 68579103 ~ 68580707 (-)

Expression



Co-expression Network