G288019


Basic Information

Item Value
gene id G288019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66359395 ~ 66359673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU326528
gctgtggggaagtttttcagtggcagggactgggagactagtcaggatcgagagaaagatgaatgaagcaaagtacagagagatccttgatgaaaacttgctccagaggggtcaggacctcagactggggtaaaggttcaccttccaactggacaaggaccctaagcacacagccaagacaacgcaggagtggctttgggacaagtctctgatgttcttgagttgcccagcctgagcccagatttgaacccgatcgaacatctctggagagtcctgaaa

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326528 True 279 lncRNA 0.51 1 66359395 66359673

Neighbor

gene id symbol gene type direction distance location
LOC110520426 LOC106582091 coding upstream 90580 66209113 ~ 66268815 (+)
LOC110520428 NA coding upstream 127205 66228399 ~ 66232190 (+)
LOC110504495 LOC106586612 coding upstream 197976 66107867 ~ 66161419 (+)
LOC118964312 LOC106586611 coding upstream 323096 66027633 ~ 66036299 (+)
LOC110520417 gdap2 coding upstream 545900 65777196 ~ 65813495 (+)
LOC110504505 LOC106586617 coding downstream 10384 66370057 ~ 66387340 (+)
LOC110520430 mspd2 coding downstream 52780 66412453 ~ 66434626 (+)
LOC110520432 LOC106586618 coding downstream 117364 66477037 ~ 66489419 (+)
LOC118964315 LOC106605670 coding downstream 194881 66554554 ~ 66555551 (+)
LOC110520433 LOC106586620 coding downstream 203115 66562788 ~ 66630141 (+)
G288014 NA non-coding upstream 8970 66349557 ~ 66350425 (+)
G287998 NA non-coding upstream 29329 66329774 ~ 66330066 (+)
G287968 NA non-coding upstream 58835 66300170 ~ 66300560 (+)
G287852 NA non-coding upstream 63565 66295542 ~ 66295830 (+)
G287843 LOC106586615 non-coding upstream 73894 66284908 ~ 66285501 (+)
G288023 NA non-coding downstream 7614 66367287 ~ 66367506 (+)
G288042 NA non-coding downstream 38219 66397892 ~ 66398127 (+)
G288076 NA non-coding downstream 128582 66488255 ~ 66488858 (+)
G288254 NA non-coding downstream 196744 66556417 ~ 66556859 (+)
G288341 NA non-coding downstream 273685 66633358 ~ 66633567 (+)
zmym2 LOC106586592 other upstream 1073839 65260200 ~ 65311166 (+)
LOC110520396 LOC100136409 other upstream 1192815 65161342 ~ 65166580 (+)
G286679 NA other upstream 1249758 65109256 ~ 65109637 (+)
G285763 NA other upstream 2052035 64306512 ~ 64307360 (+)
G288252 NA other downstream 190149 66549822 ~ 66550487 (+)
G288430 NA other downstream 371613 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 423700 66783373 ~ 66787442 (+)
G288674 NA other downstream 633498 66993171 ~ 66994131 (+)
LOC110520448 LOC106586634 other downstream 1038284 67397151 ~ 67409646 (+)

Expression


Co-expression Network