Gene
RNA
| Item | Value |
|---|---|
| gene id | G288076 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 66488255 ~ 66488858 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU326589 | True | 572 | lncRNA | 0.40 | 2 | 66488255 | 66488858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520430 | mspd2 | coding | upstream | 53629 | 66412453 ~ 66434626 (+) |
| LOC110504505 | LOC106586617 | coding | upstream | 100915 | 66370057 ~ 66387340 (+) |
| LOC110520426 | LOC106582091 | coding | upstream | 219440 | 66209113 ~ 66268815 (+) |
| LOC110520428 | NA | coding | upstream | 256065 | 66228399 ~ 66232190 (+) |
| LOC110504495 | LOC106586612 | coding | upstream | 326836 | 66107867 ~ 66161419 (+) |
| LOC118964315 | LOC106605670 | coding | downstream | 65696 | 66554554 ~ 66555551 (+) |
| LOC110520433 | LOC106586620 | coding | downstream | 73930 | 66562788 ~ 66630141 (+) |
| LOC110505407 | LOC106586622 | coding | downstream | 294551 | 66783373 ~ 66787442 (+) |
| LOC110520434 | LOC106586623 | coding | downstream | 311737 | 66800595 ~ 66809696 (+) |
| LOC110520435 | LOC106586624 | coding | downstream | 375260 | 66864118 ~ 66997509 (+) |
| G288042 | NA | non-coding | upstream | 90128 | 66397892 ~ 66398127 (+) |
| G288023 | NA | non-coding | upstream | 120749 | 66367287 ~ 66367506 (+) |
| G288019 | NA | non-coding | upstream | 128582 | 66359395 ~ 66359673 (+) |
| G288014 | NA | non-coding | upstream | 137830 | 66349557 ~ 66350425 (+) |
| G287998 | NA | non-coding | upstream | 158189 | 66329774 ~ 66330066 (+) |
| G288254 | NA | non-coding | downstream | 67559 | 66556417 ~ 66556859 (+) |
| G288341 | NA | non-coding | downstream | 144500 | 66633358 ~ 66633567 (+) |
| G288372 | NA | non-coding | downstream | 169498 | 66658356 ~ 66663722 (+) |
| G288385 | NA | non-coding | downstream | 181132 | 66669990 ~ 66670440 (+) |
| G288403 | NA | non-coding | downstream | 191585 | 66680443 ~ 66680739 (+) |
| LOC118964312 | LOC106586611 | other | upstream | 452053 | 66027633 ~ 66036299 (+) |
| zmym2 | LOC106586592 | other | upstream | 1202699 | 65260200 ~ 65311166 (+) |
| LOC110520396 | LOC100136409 | other | upstream | 1321675 | 65161342 ~ 65166580 (+) |
| G286679 | NA | other | upstream | 1378618 | 65109256 ~ 65109637 (+) |
| G285763 | NA | other | upstream | 2180895 | 64306512 ~ 64307360 (+) |
| G288252 | NA | other | downstream | 60964 | 66549822 ~ 66550487 (+) |
| G288430 | NA | other | downstream | 242428 | 66731286 ~ 66733797 (+) |
| G288674 | NA | other | downstream | 504313 | 66993171 ~ 66994131 (+) |
| LOC110520448 | LOC106586634 | other | downstream | 909099 | 67397151 ~ 67409646 (+) |
