G288341


Basic Information

Item Value
gene id G288341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66633358 ~ 66633567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU326878
GGATTGGCCAAGTGTGGCCTGATTCAGTTTTACATAGTCTGAACATTCTGATGTTGGATTGAATGACCCAATATGTTACTCTTGGCTAGCCCTTTTGCCCCTAGTAATGTCTACAATGCTGTTTTAGACCACATATTCTAGTTTTCTTttcatgtaactctgtgttgttgtctgtgttgcactgctttgctttatctttgccaggtcgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU326878 True 210 lncRNA 0.41 1 66633358 66633567

Neighbor

gene id symbol gene type direction distance location
LOC110520433 LOC106586620 coding upstream 3217 66562788 ~ 66630141 (+)
LOC118964315 LOC106605670 coding upstream 77807 66554554 ~ 66555551 (+)
LOC110520432 LOC106586618 coding upstream 143939 66477037 ~ 66489419 (+)
LOC110520430 mspd2 coding upstream 198732 66412453 ~ 66434626 (+)
LOC110504505 LOC106586617 coding upstream 246018 66370057 ~ 66387340 (+)
LOC110505407 LOC106586622 coding downstream 149842 66783373 ~ 66787442 (+)
LOC110520434 LOC106586623 coding downstream 167028 66800595 ~ 66809696 (+)
LOC110520435 LOC106586624 coding downstream 230551 66864118 ~ 66997509 (+)
LOC118944634 NA coding downstream 421309 67054876 ~ 67058489 (+)
LOC110520438 LOC106586569 coding downstream 514998 67148565 ~ 67151482 (+)
G288254 NA non-coding upstream 76499 66556417 ~ 66556859 (+)
G288076 NA non-coding upstream 144500 66488255 ~ 66488858 (+)
G288042 NA non-coding upstream 235231 66397892 ~ 66398127 (+)
G288023 NA non-coding upstream 265852 66367287 ~ 66367506 (+)
G288019 NA non-coding upstream 273685 66359395 ~ 66359673 (+)
G288372 NA non-coding downstream 24789 66658356 ~ 66663722 (+)
G288385 NA non-coding downstream 36423 66669990 ~ 66670440 (+)
G288403 NA non-coding downstream 46876 66680443 ~ 66680739 (+)
G288404 NA non-coding downstream 47569 66681136 ~ 66682049 (+)
G288423 NA non-coding downstream 87603 66721170 ~ 66721395 (+)
G288252 NA other upstream 82871 66549822 ~ 66550487 (+)
LOC118964312 LOC106586611 other upstream 597156 66027633 ~ 66036299 (+)
zmym2 LOC106586592 other upstream 1347802 65260200 ~ 65311166 (+)
LOC110520396 LOC100136409 other upstream 1466778 65161342 ~ 65166580 (+)
G286679 NA other upstream 1523721 65109256 ~ 65109637 (+)
G288430 NA other downstream 97719 66731286 ~ 66733797 (+)
G288674 NA other downstream 359604 66993171 ~ 66994131 (+)
LOC110520448 LOC106586634 other downstream 764390 67397151 ~ 67409646 (+)
G289116 NA other downstream 841406 67474973 ~ 67478929 (+)

Expression


Co-expression Network