G288397



Basic Information


Item Value
gene id G288397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66677579 ~ 66677784 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU326934
tgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctcaatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccatccaaagattttctatggggttgagatctggagactggctaggccactccagg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU326934 True 206 lncRNA 0.48 1 66677579 66677784

Neighbor


gene id symbol gene type direction distance location
LOC110520431 LOC106586619 coding downstream 139684 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 202520 66472339 ~ 66475059 (-)
LOC118964314 NA coding downstream 265206 66400067 ~ 66412373 (-)
LOC110520429 LOC106586615 coding downstream 381692 66268185 ~ 66295887 (-)
LOC110520425 LOC106582038 coding downstream 484092 66183116 ~ 66193487 (-)
LOC110504514 NA coding upstream 54453 66732237 ~ 66747293 (-)
rpe rpe coding upstream 342670 67020454 ~ 67023408 (-)
LOC110520437 LOC106586625 coding upstream 388573 67066357 ~ 67078648 (-)
LOC110520442 LOC106586628 coding upstream 547077 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 597945 67275729 ~ 67286960 (-)
G288356 NA non-coding downstream 30989 66646379 ~ 66646590 (-)
G288351 NA non-coding downstream 33229 66643990 ~ 66644350 (-)
G288290 NA non-coding downstream 119310 66558011 ~ 66558269 (-)
G288288 NA non-coding downstream 121375 66555568 ~ 66556204 (-)
G288287 NA non-coding downstream 122156 66555186 ~ 66555423 (-)
G288507 NA non-coding upstream 82190 66759974 ~ 66760307 (-)
G288525 NA non-coding upstream 112064 66789848 ~ 66790089 (-)
G288528 NA non-coding upstream 118326 66796110 ~ 66796898 (-)
G288563 NA non-coding upstream 140870 66818654 ~ 66829553 (-)
G288576 NA non-coding upstream 162152 66839936 ~ 66840155 (-)
G287112 NA other downstream 1097084 65579791 ~ 65580495 (-)
G287042 NA other downstream 1230296 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1377162 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1441671 65235180 ~ 65235908 (-)
G286638 NA other downstream 1601594 65054700 ~ 65075985 (-)
G288578 NA other upstream 164887 66842671 ~ 66842881 (-)
G289678 NA other upstream 949048 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1205968 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1528806 68206330 ~ 68208674 (-)
G290542 NA other upstream 1901319 68579103 ~ 68580707 (-)

Expression



Co-expression Network