G288563


Basic Information

Item Value
gene id G288563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66818654 ~ 66829553 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU327174
cagtgatggagtactgtggGGGGTGAAAACATTGGTGGAGTACTGTagagggtaaacacagtgatggagtactgtaggagtaaacacagtgatggagtattgtagggggtaaacacagtgatggagtactgtaggagtaaacacagtgatgagtactgtagggggtaaacacagtgatgagtactgtagggggtaaacacagtgatagAGTACTgtaggggtaaacacagtgatggagcactgtagggggtaaacacactGATGGAGTTCTATacggggtaaacacagtgatgagtactgttaggagtaaacacagtgatggagttctatagggggtaaacacagtgatgagtactgtaagggggtaaacacagtgatggagtactgtaggagtaaacacagtgatggagtatttaagggggtaaacacagtgatggagtactgtaggaataaacacagtgatggagtactg
>TU327184
cagtgatggagtactgtggGGGGTGAAAACATTGGTGGAGTACTGTagagggtaaacacagtgatggagtactgtaggagtaaacacagtgatggagtattgtagggggtaaacacagtgatggagtactgtaggagtaaacacagtgatgagtactgtagggggtaaacacagtgatggagttctgtagggggtaaacacagtgataagtactgtagggggtaaacacagtgatggagtactttagggggtaaacacagttaTGGAGTACTGTagagggtaaacacagtgatggagtactgtagggggtaaacacagtgatggagttctgtagggagtaaacacagtgatggagctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327174 False 472 lncRNA 0.45 2 66818654 66829553
TU327184 True 359 lncRNA 0.46 2 66820222 66829553

Neighbor

gene id symbol gene type direction distance location
LOC110504514 NA coding downstream 71361 66732237 ~ 66747293 (-)
LOC110520431 LOC106586619 coding downstream 280759 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 343595 66472339 ~ 66475059 (-)
LOC118964314 NA coding downstream 406281 66400067 ~ 66412373 (-)
LOC110520429 LOC106586615 coding downstream 522767 66268185 ~ 66295887 (-)
rpe rpe coding upstream 190901 67020454 ~ 67023408 (-)
LOC110520437 LOC106586625 coding upstream 236804 67066357 ~ 67078648 (-)
LOC110520442 LOC106586628 coding upstream 395308 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 446176 67275729 ~ 67286960 (-)
LOC110520451 LOC106586637 coding upstream 695048 67524601 ~ 67542329 (-)
G288528 NA non-coding downstream 21756 66796110 ~ 66796898 (-)
G288525 NA non-coding downstream 28565 66789848 ~ 66790089 (-)
G288507 NA non-coding downstream 58347 66759974 ~ 66760307 (-)
G288397 NA non-coding downstream 140870 66677579 ~ 66677784 (-)
G288356 NA non-coding downstream 172064 66646379 ~ 66646590 (-)
G288576 NA non-coding upstream 10383 66839936 ~ 66840155 (-)
G288579 NA non-coding upstream 14289 66843842 ~ 66844065 (-)
G288586 NA non-coding upstream 19426 66848979 ~ 66849225 (-)
G288746 NA non-coding upstream 34896 66864449 ~ 66865026 (-)
G288749 NA non-coding upstream 39541 66869094 ~ 66869321 (-)
G287112 NA other downstream 1238159 65579791 ~ 65580495 (-)
G287042 NA other downstream 1371371 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1518237 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1582746 65235180 ~ 65235908 (-)
G286638 NA other downstream 1742669 65054700 ~ 65075985 (-)
G288578 NA other upstream 13118 66842671 ~ 66842881 (-)
G289678 NA other upstream 797279 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1054199 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1377037 68206330 ~ 68208674 (-)
G290542 NA other upstream 1749550 68579103 ~ 68580707 (-)

Expression


Co-expression Network