Gene
RNA
| Item | Value |
|---|---|
| gene id | G288579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 66843842 ~ 66844065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable JmjC domain-containing histone demethylation protein 2C, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU327203 | True | 224 | lncRNA | 0.43 | 1 | 66843842 | 66844065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504514 | NA | coding | downstream | 96549 | 66732237 ~ 66747293 (-) |
| LOC110520431 | LOC106586619 | coding | downstream | 305947 | 66490468 ~ 66537895 (-) |
| LOC118944607 | LOC106582097 | coding | downstream | 368783 | 66472339 ~ 66475059 (-) |
| LOC118964314 | NA | coding | downstream | 431469 | 66400067 ~ 66412373 (-) |
| LOC110520429 | LOC106586615 | coding | downstream | 547955 | 66268185 ~ 66295887 (-) |
| rpe | rpe | coding | upstream | 176389 | 67020454 ~ 67023408 (-) |
| LOC110520437 | LOC106586625 | coding | upstream | 222292 | 67066357 ~ 67078648 (-) |
| LOC110520442 | LOC106586628 | coding | upstream | 380796 | 67224861 ~ 67236245 (-) |
| LOC110520443 | LOC106586629 | coding | upstream | 431664 | 67275729 ~ 67286960 (-) |
| LOC110520451 | LOC106586637 | coding | upstream | 680536 | 67524601 ~ 67542329 (-) |
| G288576 | NA | non-coding | downstream | 3687 | 66839936 ~ 66840155 (-) |
| G288563 | NA | non-coding | downstream | 14289 | 66818654 ~ 66829553 (-) |
| G288528 | NA | non-coding | downstream | 46944 | 66796110 ~ 66796898 (-) |
| G288525 | NA | non-coding | downstream | 53753 | 66789848 ~ 66790089 (-) |
| G288507 | NA | non-coding | downstream | 83535 | 66759974 ~ 66760307 (-) |
| G288586 | NA | non-coding | upstream | 4914 | 66848979 ~ 66849225 (-) |
| G288746 | NA | non-coding | upstream | 20384 | 66864449 ~ 66865026 (-) |
| G288749 | NA | non-coding | upstream | 25029 | 66869094 ~ 66869321 (-) |
| G288760 | NA | non-coding | upstream | 41763 | 66885828 ~ 66886126 (-) |
| G288761 | NA | non-coding | upstream | 43200 | 66887265 ~ 66887528 (-) |
| G288578 | NA | other | downstream | 961 | 66842671 ~ 66842881 (-) |
| G287112 | NA | other | downstream | 1263347 | 65579791 ~ 65580495 (-) |
| G287042 | NA | other | downstream | 1396559 | 65446825 ~ 65447283 (-) |
| G286985 | LOC106586592 | other | downstream | 1543425 | 65298207 ~ 65300417 (-) |
| G286953 | LOC107579696 | other | downstream | 1607934 | 65235180 ~ 65235908 (-) |
| G289678 | NA | other | upstream | 782767 | 67626832 ~ 67633493 (-) |
| G289653 | LOC106607871 | other | upstream | 1039687 | 67883752 ~ 67886232 (-) |
| si:ch211-214p13.7 | NA | other | upstream | 1362525 | 68206330 ~ 68208674 (-) |
| G290542 | NA | other | upstream | 1735038 | 68579103 ~ 68580707 (-) |
| G290567 | NA | other | upstream | 1782267 | 68626332 ~ 68647620 (-) |
