G288580


Basic Information

Item Value
gene id G288580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66844480 ~ 66844720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU327204
accatcagactgttgaacagcttctatcaccagaccatcagactgttgaacagcttctattaccagaccatcagactgttgaacagcttctattaccagaccatcagactgttgaacagcttctattaccagaccatcagactgttgaacagcttctattaccagaccatcagactgttgaacagcttctatcaccagaccatcagactgttgaacagcttctattaccagaccatcagac

Function

NR:

description
probable JmjC domain-containing histone demethylation protein 2C, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327204 True 241 lncRNA 0.44 1 66844480 66844720

Neighbor

gene id symbol gene type direction distance location
LOC110520434 LOC106586623 coding upstream 34784 66800595 ~ 66809696 (+)
LOC110505407 LOC106586622 coding upstream 57038 66783373 ~ 66787442 (+)
LOC110520433 LOC106586620 coding upstream 214339 66562788 ~ 66630141 (+)
LOC118964315 LOC106605670 coding upstream 288929 66554554 ~ 66555551 (+)
LOC110520432 LOC106586618 coding upstream 355061 66477037 ~ 66489419 (+)
LOC110520435 LOC106586624 coding downstream 19398 66864118 ~ 66997509 (+)
LOC118944634 NA coding downstream 210156 67054876 ~ 67058489 (+)
LOC110520438 LOC106586569 coding downstream 303845 67148565 ~ 67151482 (+)
LOC110520439 LOC106586626 coding downstream 325533 67170253 ~ 67173369 (+)
LOC110520441 LOC106586627 coding downstream 332641 67177361 ~ 67223961 (+)
G288577 NA non-coding upstream 2015 66842258 ~ 66842465 (+)
G288574 NA non-coding upstream 4562 66839693 ~ 66839918 (+)
G288573 NA non-coding upstream 5127 66839153 ~ 66839353 (+)
G288535 NA non-coding upstream 40674 66803477 ~ 66803806 (+)
G288583 NA non-coding downstream 791 66845511 ~ 66845856 (+)
G288584 NA non-coding downstream 1650 66846370 ~ 66846611 (+)
G288588 NA non-coding downstream 8938 66853658 ~ 66853910 (+)
G288589 NA non-coding downstream 9910 66854630 ~ 66854968 (+)
G288593 NA non-coding downstream 12830 66857550 ~ 66857820 (+)
G288430 NA other upstream 110683 66731286 ~ 66733797 (+)
G288252 NA other upstream 293993 66549822 ~ 66550487 (+)
LOC118964312 LOC106586611 other upstream 808278 66027633 ~ 66036299 (+)
zmym2 LOC106586592 other upstream 1558924 65260200 ~ 65311166 (+)
G288674 NA other downstream 148451 66993171 ~ 66994131 (+)
LOC110520448 LOC106586634 other downstream 553237 67397151 ~ 67409646 (+)
G289116 NA other downstream 630253 67474973 ~ 67478929 (+)
LOC110505416 LOC106586647 other downstream 674606 67519326 ~ 67520162 (+)
G289455 NA other downstream 780633 67625353 ~ 67632210 (+)

Expression


Co-expression Network