G288749



Basic Information


Item Value
gene id G288749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66869094 ~ 66869321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU327389
TTGTGATATGGCAGGCACAGgtctgttacgtttatggggAGTCAattaacctctttgggctagggggcagtatttagaCGTCTGGATGacaagcgtgcccaaagtaaactgcctgttactcaggatatgcatataattggtggggagaacaagtatttgataacctgcaaaatcagcagtgtttcctacttacaaagcatgtctgtaatttttatcataggtagaTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU327389 True 228 lncRNA 0.41 1 66869094 66869321

Neighbor


gene id symbol gene type direction distance location
LOC110504514 NA coding downstream 121801 66732237 ~ 66747293 (-)
LOC110520431 LOC106586619 coding downstream 331199 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 394035 66472339 ~ 66475059 (-)
LOC118964314 NA coding downstream 456721 66400067 ~ 66412373 (-)
LOC110520429 LOC106586615 coding downstream 573207 66268185 ~ 66295887 (-)
rpe rpe coding upstream 151133 67020454 ~ 67023408 (-)
LOC110520437 LOC106586625 coding upstream 197036 67066357 ~ 67078648 (-)
LOC110520442 LOC106586628 coding upstream 355540 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 406408 67275729 ~ 67286960 (-)
LOC110520451 LOC106586637 coding upstream 655280 67524601 ~ 67542329 (-)
G288746 NA non-coding downstream 4068 66864449 ~ 66865026 (-)
G288586 NA non-coding downstream 19869 66848979 ~ 66849225 (-)
G288579 NA non-coding downstream 25029 66843842 ~ 66844065 (-)
G288576 NA non-coding downstream 28939 66839936 ~ 66840155 (-)
G288563 NA non-coding downstream 39541 66818654 ~ 66829553 (-)
G288760 NA non-coding upstream 16507 66885828 ~ 66886126 (-)
G288761 NA non-coding upstream 17944 66887265 ~ 66887528 (-)
G288765 NA non-coding upstream 23735 66893056 ~ 66893263 (-)
G288766 LOC106586624 non-coding upstream 24578 66893899 ~ 66894253 (-)
G288777 NA non-coding upstream 52376 66921697 ~ 66922439 (-)
G288578 NA other downstream 26213 66842671 ~ 66842881 (-)
G287112 NA other downstream 1288599 65579791 ~ 65580495 (-)
G287042 NA other downstream 1421811 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1568677 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1633186 65235180 ~ 65235908 (-)
G289678 NA other upstream 757511 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1014431 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1337269 68206330 ~ 68208674 (-)
G290542 NA other upstream 1709782 68579103 ~ 68580707 (-)
G290567 NA other upstream 1757011 68626332 ~ 68647620 (-)

Expression



Co-expression Network