G289187


Basic Information

Item Value
gene id G289187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67197366 ~ 67197865 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU327874
gcattcggaaagtattcagaccccttgactttttccacattctgttacgttacagccttattctaaaatggattcaatagttttttccccctcatcaatctacacacaataccccaagtggtctgaataccttctgaatgcactTTAATGTTTCCGACATTTTAGGACCACAAAACAACTATTGATTAAGAATCACAGAGTTACAGCAAGTCGCAAAggaaacaggagctgcctccactattccagcaccatttcatcaTCAACAtttcatcatcaaatcacctatgcttagtctaatacagtgacagctaaaagataccaaaattgatttagtccaatcaatgtaagctaaatatgatgtggctgtctaTGATACTGATGTGTGTGTAAGTAGAAAAACCATGTTGACTCATCTTACTTGTAGAGAAAGGCCAATGCCATCTTCCTCTTTCCTGTTGATgaaacggtctatcactctgATACAGTACATCATTTTAGTt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327874 True 500 lncRNA 0.38 1 67197366 67197865

Neighbor

gene id symbol gene type direction distance location
LOC110520437 LOC106586625 coding downstream 118718 67066357 ~ 67078648 (-)
rpe rpe coding downstream 173958 67020454 ~ 67023408 (-)
LOC110504514 NA coding downstream 450073 66732237 ~ 66747293 (-)
LOC110520431 LOC106586619 coding downstream 659471 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 722307 66472339 ~ 66475059 (-)
LOC110520442 LOC106586628 coding upstream 26996 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 77864 67275729 ~ 67286960 (-)
LOC110520451 LOC106586637 coding upstream 326736 67524601 ~ 67542329 (-)
LOC110520452 LOC106586638 coding upstream 347732 67545597 ~ 67568698 (-)
LOC110520453 LOC106586647 coding upstream 419625 67617490 ~ 67636658 (-)
G288828 NA non-coding downstream 189827 67007267 ~ 67007539 (-)
G288824 NA non-coding downstream 203235 66993001 ~ 66994131 (-)
G288781 NA non-coding downstream 270017 66927068 ~ 66927349 (-)
G288780 NA non-coding downstream 270864 66926276 ~ 66926502 (-)
G288777 NA non-coding downstream 274927 66921697 ~ 66922439 (-)
G289197 NA non-coding upstream 7906 67205771 ~ 67205978 (-)
G289199 NA non-coding upstream 10268 67208133 ~ 67208438 (-)
G289205 NA non-coding upstream 14113 67211978 ~ 67212188 (-)
G289231 NA non-coding upstream 64598 67262463 ~ 67262828 (-)
G289200 LOC106586630 non-coding upstream 90758 67288623 ~ 67294508 (-)
G288578 NA other downstream 354485 66842671 ~ 66842881 (-)
G287112 NA other downstream 1616871 65579791 ~ 65580495 (-)
G287042 NA other downstream 1750083 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1896949 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1961458 65235180 ~ 65235908 (-)
G289678 NA other upstream 428967 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 685887 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1008725 68206330 ~ 68208674 (-)
G290542 NA other upstream 1381238 68579103 ~ 68580707 (-)
G290567 NA other upstream 1428467 68626332 ~ 68647620 (-)

Expression


Co-expression Network