XLOC_022235



Basic Information


Item Value
gene id XLOC_022235
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 16850836 ~ 16852947 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044724
TGAGTAGACAGATCTTCAGATTGTCTGTAAATCTGATGAGTAACATGATTTTGTCTTTGTCTCCAGCAGGATGAAGCATTTGTGAATCAGATGCCTCATCAGAACCAGCAGCATGTGGAGGTTGTAACCAGTAGGGGACCAAATCAGATCCCTGAACCACAGCCTGAGGAGCAGCAACAGAATGAACCTGAGAGACCTCAGCAGAGAGATTTAGCAATAAATGGAAGAGTCCGTGGGGTTCTGCGTGGTCTTCAGTCTGCTCGCCCTCTCAGAAGAATGAGAGAACAGCAGGATGAAGCATTTGTAAATCAGATGCCTCATCAGAACAAGCAGGATGTGGAGGTTGTAGCCAGTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044724 True 356 lncRNA 0.47 2 16850836 16852947

Neighbor


gene id symbol gene type direction distance location
XLOC_022234 si:dkey-63j12.4 coding downstream 7187 16840572 ~ 16843649 (-)
XLOC_022233 AL732515.1 coding downstream 104413 16744782 ~ 16746423 (-)
XLOC_022232 si:ch211-224l10.4 coding downstream 113675 16719743 ~ 16737161 (-)
XLOC_022231 NA coding downstream 141598 16693578 ~ 16709238 (-)
XLOC_022230 fkbp1ab coding downstream 158524 16688420 ~ 16692312 (-)
XLOC_022236 cdc42l2 coding upstream 103238 16956185 ~ 16960972 (-)
XLOC_022237 NA coding upstream 108322 16961269 ~ 17004783 (-)
XLOC_022238 dnmt3bb.1 coding upstream 158507 17011454 ~ 17101360 (-)
XLOC_022239 CR318674.1 coding upstream 191347 17044294 ~ 17046384 (-)
XLOC_022240 BX927275.3 coding upstream 323157 17176104 ~ 17176218 (-)
XLOC_022228 NA non-coding downstream 202797 16644124 ~ 16648039 (-)
XLOC_022227 CR318668.1 non-coding downstream 288675 16561233 ~ 16562161 (-)
XLOC_022226 NA non-coding downstream 331990 16516982 ~ 16518846 (-)
XLOC_022241 BX649300.1 non-coding upstream 501206 17354153 ~ 17355702 (-)
XLOC_022247 NA non-coding upstream 805047 17657994 ~ 17839198 (-)

Expression



Co-expression Network