G289371 (LOC105911894)



Basic Information


Item Value
gene id G289371
gene name LOC105911894
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67501613 ~ 67502129 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU328092
TGGAGGGCAGGTTCGGGGAGCGCGCAGGGGGCGAGTCGTCATCTGAGCTCGCCACGGTCTTGATGGCATCATGATAGAGGGGGGTGGAGCTGGGCATGGCGAATTTGGACATGCGTGACATCATGATGGAGAGGGGGTTCTGGGATAGCGTAGGTTCAGGGGGTAGGGAGTAAGGGCTGCCGGTCGGGGCACTGCCTGGACCCCCCTGGAGGGGCATGGAGCCAGACTGGGCTCCTGACGAGGGGGGGGCCGAGAGGGGGCCATTACCACCTGTGGAGAGGTGAGAGATATGAAAGTAAACTCTTTACATGAGTCCTATTCATTAAGTAGCTAAAAATACCCTGGTTTACCCTGGTTACTTGAAAGAAGGGACAATGTGTCAAACCCGTTTCAGATTGACATACATGTCAATTGTAAATAATGACTTTAATGAATTTAGATACAGTGAAGTTACATTGCCACAAGGGGGAGCAATTTACCTGAAATGGGAAAATGTTTTTTGATTAGGGAAAATGTG
>TU328091
TGGAGGGCAGGTTCGGGGAGCGCGCAGGGGGCGAGTCGTCATCTGAGCTCGCCACGGTCTTGATGGCATCATGATAGAGGGGGGTGGAGCTGGGCATGGCGAATTTGGACATGCGTGACATCATGATGGAGAGGGGGTTCTGGGATAGCGTAGGTTCAGGGGGTAGGGAGTAAGGGCTGCCGGTCGGGGCACTGCCTGGACCCCCCTGGAGGGGCATGGAGCCAGACTGGGCTCCTGACGAGGGGGGGGCCGAGAGGGGGCCATTACCA

Function


NR:

description
B-cell CLL/lymphoma 9 protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU328092 False 517 lncRNA 0.51 1 67501613 67502129
TU328091 True 269 lncRNA 0.65 1 67501861 67502129

Neighbor


gene id symbol gene type direction distance location
LOC110520443 LOC106586629 coding downstream 214653 67275729 ~ 67286960 (-)
LOC110520442 LOC106586628 coding downstream 265368 67224861 ~ 67236245 (-)
LOC110520437 LOC106586625 coding downstream 422965 67066357 ~ 67078648 (-)
rpe rpe coding downstream 478205 67020454 ~ 67023408 (-)
LOC110504514 NA coding downstream 754320 66732237 ~ 66747293 (-)
LOC110520451 LOC106586637 coding upstream 22472 67524601 ~ 67542329 (-)
LOC110520452 LOC106586638 coding upstream 43468 67545597 ~ 67568698 (-)
LOC110520453 LOC106586647 coding upstream 115361 67617490 ~ 67636658 (-)
LOC110520454 LOC106586643 coding upstream 182921 67685050 ~ 67706221 (-)
LOC118944713 LOC106592868 coding upstream 274282 67776411 ~ 67786849 (-)
G289360 NA non-coding downstream 16951 67479189 ~ 67484662 (-)
G289356 NA non-coding downstream 23583 67474617 ~ 67478030 (-)
G289346 NA non-coding downstream 46487 67454414 ~ 67455126 (-)
G289337 NA non-coding downstream 67765 67433642 ~ 67433848 (-)
G289327 NA non-coding downstream 72067 67411658 ~ 67429546 (-)
G289378 NA non-coding upstream 10785 67512914 ~ 67513155 (-)
G289382 NA non-coding upstream 16753 67518882 ~ 67519252 (-)
G289394 NA non-coding upstream 41699 67543828 ~ 67544233 (-)
G289421 NA non-coding upstream 88936 67591065 ~ 67591402 (-)
G289674 NA non-coding upstream 119989 67622118 ~ 67628501 (-)
G288578 NA other downstream 658732 66842671 ~ 66842881 (-)
G287112 NA other downstream 1921118 65579791 ~ 65580495 (-)
G287042 NA other downstream 2054330 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 2201196 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 2265705 65235180 ~ 65235908 (-)
G289678 NA other upstream 124703 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 381623 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 704461 68206330 ~ 68208674 (-)
G290542 NA other upstream 1076974 68579103 ~ 68580707 (-)
G290567 NA other upstream 1124203 68626332 ~ 68647620 (-)

Expression



Co-expression Network