G289452


Basic Information

Item Value
gene id G289452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67622524 ~ 67628676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328185
GTTGAGATTAGTGATAAACGTCTAAAGAATTCTATTAGGTTGATATTGAAGGCCAATCTGATGGAGAGTGGTATTCTTGAAGTTACCACTGAGCCAGCCTCTGCTGAGAGTTTGTCATCTCCCCATAACGTTACAATGGCCATTCCATCGGTTAGTCCAAGTAGTCTTCTTTTTGAACAGCAGAAAGAACTGCTTTTGTTACAGCTAGAGCATGATCGGCAAAGTAATCGTGagaagctag

Function

NR:

description
uncharacterized protein LOC110485977, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328185 True 241 lncRNA 0.41 2 67622524 67628676

Neighbor

gene id symbol gene type direction distance location
LOC110504522 LOC106586570 coding upstream 19292 67599901 ~ 67603232 (+)
LOC118964316 NA coding upstream 99807 67521551 ~ 67522717 (+)
LOC110505416 LOC106586647 coding upstream 102362 67519326 ~ 67520162 (+)
LOC110520450 LOC106586636 coding upstream 118300 67461512 ~ 67504224 (+)
LOC110520449 LOC106586635 coding upstream 194152 67418016 ~ 67428372 (+)
LOC118936465 LOC106586642 coding downstream 98217 67726893 ~ 67734046 (+)
LOC110520459 LOC106586086 coding downstream 252740 67881416 ~ 67887339 (+)
LOC110520461 LOC100136473 coding downstream 316202 67944878 ~ 67980956 (+)
lrrc58b LOC106586648 coding downstream 353655 67982331 ~ 67989941 (+)
LOC110520463 LOC106586649 coding downstream 373629 68002305 ~ 68037956 (+)
G289428 NA non-coding upstream 25922 67596398 ~ 67596602 (+)
G289156 NA non-coding upstream 76595 67545611 ~ 67545929 (+)
G289153 NA non-coding upstream 79106 67543219 ~ 67543418 (+)
G289142 NA non-coding upstream 89873 67529103 ~ 67532651 (+)
G289144 NA non-coding upstream 90280 67531350 ~ 67532244 (+)
G289459 NA non-coding downstream 8369 67637045 ~ 67690460 (+)
G289476 NA non-coding downstream 32177 67660853 ~ 67664209 (+)
G289486 NA non-coding downstream 50186 67678862 ~ 67682122 (+)
G289521 LOC106592868 non-coding downstream 150993 67779669 ~ 67874790 (+)
G289116 NA other upstream 143595 67474973 ~ 67478929 (+)
LOC110520448 LOC106586634 other upstream 212974 67397151 ~ 67409646 (+)
G288674 NA other upstream 628393 66993171 ~ 66994131 (+)
LOC110505407 LOC106586622 other upstream 837738 66783373 ~ 66787442 (+)
G289517 NA other downstream 133061 67761737 ~ 67762423 (+)
G289883 NA other downstream 595049 68223725 ~ 68225306 (+)
LOC110520478 LOC106586673 other downstream 1997667 69625755 ~ 69635303 (+)
G291327 NA other downstream 2066719 69695395 ~ 69695836 (+)

Expression


Co-expression Network