G289678


Basic Information

Item Value
gene id G289678
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67626832 ~ 67633493 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328494
cagtagcgtaagtgagtgttttgcatgcatgaatgtgataatgcagggtgttgaaaggtgccaaagcaaacaaacaaacaaaaagccaACATGAACcgcaacacaatctacaaatgtctgcatggagagagtctcctccatgaatggggaaggggtgtatttatcctgggaaacacctgggcccaggtgtttcccatgtagctgacgaccctctcaactccgcccaccggcatcctaataaggaaacaagaacaaagacaaaatacggcagacagagtgggagggtcgtcacattccCCCCCATAAAACCGGGGACCAACAAGGACCCCGGAACAACATACCAGCCCCTGCAGTCCCAAATTGGTGAGGGGTTATGTGTTCACACTTACAATTTGCCCCAGCCAACCTCCTCCCCAAACCTCAGCAACCTTCGCACAGGAAGCAACATTTAAGAGGAACGAAGAAAACAAGACCAGGagggagcagacaggacagagagaacatgacaATAGGAAGCAATGGTCAGTCCCGTAAACATTTAGGAGCAGGGTGCACGAGAGCGCATCAGCAATCACGTTTTCAGATCCCCTGATGTGCCGCACATCGAGATGGAATGATTGTAAAAATAAACACCATCGCATTATCCTCTGGTTTGGACACATCATGGACCTCAAAAAAGTGAGGGGGTTATGGTCGGTGTAGACCACAATAGGTACTACCCCCGACCCGAC

Function

NR:

description
uncharacterized protein LOC111608951

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU328494 True 731 TUCP 0.49 2 67626832 67633493

Neighbor

gene id symbol gene type direction distance location
LOC110520452 LOC106586638 coding downstream 58134 67545597 ~ 67568698 (-)
LOC110520451 LOC106586637 coding downstream 84503 67524601 ~ 67542329 (-)
LOC110520443 LOC106586629 coding downstream 339872 67275729 ~ 67286960 (-)
LOC110520442 LOC106586628 coding downstream 390587 67224861 ~ 67236245 (-)
LOC110520437 LOC106586625 coding downstream 548184 67066357 ~ 67078648 (-)
LOC110520454 LOC106586643 coding upstream 51557 67685050 ~ 67706221 (-)
LOC118944713 LOC106592868 coding upstream 142918 67776411 ~ 67786849 (-)
LOC110520455 LOC106586642 coding upstream 203212 67836705 ~ 67881418 (-)
LOC110520458 LOC106586647 coding upstream 266863 67900356 ~ 67916858 (-)
nr1i2 nr1i2 coding upstream 492110 68125603 ~ 68147765 (-)
G289421 NA non-coding downstream 35430 67591065 ~ 67591402 (-)
G289394 NA non-coding downstream 82599 67543828 ~ 67544233 (-)
G289382 NA non-coding downstream 107580 67518882 ~ 67519252 (-)
G289378 NA non-coding downstream 113677 67512914 ~ 67513155 (-)
G289371 LOC105911894 non-coding downstream 124703 67501613 ~ 67502129 (-)
G289652 NA non-coding upstream 45369 67678862 ~ 67680167 (-)
G289649 NA non-coding upstream 71541 67705034 ~ 67881378 (-)
G289716 NA non-coding upstream 119807 67753300 ~ 67808257 (-)
G289754 NA non-coding upstream 290439 67923932 ~ 67924167 (-)
G288578 NA other downstream 783951 66842671 ~ 66842881 (-)
G287112 NA other downstream 2046337 65579791 ~ 65580495 (-)
G287042 NA other downstream 2179549 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 2326415 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 2390924 65235180 ~ 65235908 (-)
G289653 LOC106607871 other upstream 250259 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 573097 68206330 ~ 68208674 (-)
G290542 NA other upstream 945610 68579103 ~ 68580707 (-)
G290567 NA other upstream 992839 68626332 ~ 68647620 (-)
G290598 NA other upstream 1076874 68710367 ~ 68717385 (-)

Expression


Co-expression Network