G289486


Basic Information

Item Value
gene id G289486
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67678862 ~ 67682122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328233
gttcaaatcaaattttattggtcacatacaaatgtttaccagatgttattgcgggtgtagcgaaatgcttgtaaattCGAcatatttgatttgatagagagagacattgagagagacaGCGAGTGAAAGAGAGACATCGAGGTGGTTACAGCTACTGCAGATATAGAATGTAAATAGacctacactcacacacccatACCAAGGCAGATATATGACACCCATAACAATGACTCTACAGTCTCTGAGCAGTAGGTGGAACTTAAAACCTTTTAAGGATTAGCCCCTTTTTtcaaattttcgcctaaaatgacatacccaaatctaactgcctatagctcaggccctgaagcaaggatatgcatattcttggtaccatttgaaaggaaacactcatGGAAATATGAAAGGAATGTAGTAAAATATAACAATAGGTCTGGAAAAAAGATAAAACAAAGAAAAAATCAACTGttcttttttttgtaccatcataattttttgtaccatcataattttttgtaccatcatcattttttgtaccatcatcattttttgtaccatcatcattttttgtaccatcatcatTTTTTGTACGATCATAATTTTTTGTACGATCATAATTTTTTGAACCATCATCATTTTTTTAACCATCATCTAAAGGCCATAATGTAAGAGTAGACAGTCACCAAtgatcaatgtggaactatacATGAAAGaacaacccaaacacacacagcccGTCATGTGAAACTTATCCAAATGCTCATGTTACATGATCAACACACTTTAAATAAACCCTTTCATGTTTTCTATCTGGTCAATTGCAATATACATCATTAGTAGCTACACATTTACTGTACTGGAGGTATGGGCAATCAAGTTTTAACAGGTTTTAGCTCACCATGATGAGAGGTACATGCATCTCAGGATTTAAGTCTCACACACACCCAAAATCTGTTTTTCAGCTTCACCAGTTCCACTGAAAAGTATTCACAGCCCAGTGATTATGCCGTTAAGGAATGCTGGATATAGTGGTGTATTCTTTATATTTCAGCGtttgttgcaccattagggaaaCTATGGGTGCTTCTCCTGTTTACTGCTTGAGAAAGAGgatacactcttagaaataaaGATTCTAAGTACAAAGACATAGGGTTCGTGTCCCCacaagtcattaaaactcgtttttaaaccactccacaaatttcttgtgaacaaactatagttatggcaagttggttaggacatctactttgtgcatgacacaagtaattttttacaacaattgtttatggacagatgatttcacttataattcactgtatcacaattccagtgggtcagacgaaTGAaaacgctaagttgactgtgcctttaaacaacttggaaaattccagaagatgacgtcatgcctttagaagcttcgattaggctaattgacatcatttgagtcaattggaggtgtacctgtggatgtatttcaaggcataccttcaaactcagtacctctttgcttgacatcatgggaaaatctaaagaaatcagacaattgtagacctccacaagtctggttcattcttgggagcaatttccaaacgcctgaaggtaccacgttgatCCGTACAAACAAACGTGTGCAAgtaaaaacaccatgggacaacgcagctgtcacaccgctcaggaaggagacgtgttctgtctcctagagatgaacgtaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagattctggaggaaacaggtacaaaagtatctatatccacagtaaaacgagtcctatatcgacataacctgaaaggccactcaacaacagggaagccactgctccaaaaccaccatataaaagccagactacggtttgcaactgcacctgGGGATGAAGATCAcactttttggaggaatgtcctctggtctgatgaaacaaaactagaactgtttagccataatgaccatcattctgtttggaagaaaaagggggaggcttgcaagccgaagaacaccatccaaaccgtgaagaatgggggtggcagcatcatattgtgggggtgctttgctgcaggagggactggtgcacttcacaaaatagatctcATCATTTAGCAGGAAAATgttgttgatatattgaagcaacatctcaagacatcagtcaggaagttaaatcttgatTGCAAATGGGTcctcaaatggacaatgaccccaagcatacttccttCCAAAGTTgtcgcaaaatggcttaaggacaacaaagtcaaggtatttgagtgtccatcacaaagccacAAATTTGCAGGCAGAACTgcaaaagtgtgtgcgagcaaggaggccaacaaacctgactcagttacaccagctctgtcagggggaatgggccaaaattcccccaacttattgtgggaagcttgtggaaggctacccaaaacgtttgacccaagttaaacaattgaaaggcaatgctactatacactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaataaacacacaattctctctactattattctcacatttcacattcttaaaataaagggatcctaactgacgtaaAACAGGAAAATGTTtgctgggattaaatgtcaggaattttgaaaaaattagtttaaatgtacttggctaaggtgcatgtaaacttctgacttcaactgtatatagagtGTGTTAACAGGGTTTTAGGCCACCACGACCTGCCAggacagcttcaatgcgccttcgCATCGATACTAAGAATGGACTTAGTGCTCAGAGTAACAGCATATTAATAAATGTAGGAACTTGGCCGGAGGCTTAGCTACTAGCATTCAGTCCAGAAACAGTGACTTATTTGAGAGAAAGAGTTTCAATGTCCGTTATCTGATATCTCTTTGTCTTGATAGTTATTTTTACAGTTTTTTGTTTTCATCAATCTCTCTGTATCACCCCTCTGTCACTGGTTACACATTCCAAAGGGAAACTTCCCATCTCCGGGGAACAGAGTAATGTGAGGGAGTCATGTTTTTGCTGTGTATGCACTGTACTTTTGAATTCTATGTGTTCTTTTGTATTTACTGCTAGCCTTCTGGCCAGGTCTCCCTTTTCTGAACCCAAATGGGACTTtctggctaaataaaggttaaataaaaaatattataaaaGTAGCAATT
>TU328236
gttcaaatcaaattttattggtcacatacaaatgtttaccagatgttattgcgggtgtagcgaaatgcttgtaaattCGAcatatttgatttgatagagagagacattgagagagacaGCGAGTGAAAGAGAGACATCGAGGTGGTTACAGCTACTGCAGATATAGAATGTAAATAGacctacactcacacacccatACCAAGGCAGATATATGACACCCATAACAATGACTCTACAGTCTCTGAGCAGTAGGTGGAACTTAAAACCTTTTAAGGATTAGCCCCTTTTTtcaaattttcgcctaaaatgacatacccaaatctaactgcctatagctcaggccctgaagcaaggatatgcatattcttggtaccatttgaaaggaaacactcatGGAAATATGAAAGGAATGTAGTAAAATATAACAATAGGTCTGGAAAAAAGATAAAACAAAGAAAAAATCAACTGttcttttttttgtaccatcataatttttgtaccatcatcattttttgtaccatcatcattttttgtaccatcatcattttttgtaccatcatcatTTTTTGTACGATCATAATTTTTTGTACGATCATAATTTTTTGAACCATCATCATTTTTTTAACCATCATCTAAAGGCCATAATGTAAGAGTAGACAGTCACCAAtgatcaatgtggaactatacATGAAAGaacaacccaaacacacacagcccGTCATGTGAAACTTATCCAAATGCTCATGTTACATGATCAACACACTTTAAATAAACCCTTTCATGTTTTCTATCTGGTCAATTGCAATATACATCATTAGTAGCTACACATTTACTGTACTGGAGGTATGGGCAATCAAGTTTTAACAGGTTTTAGCTCACCATGATGAGAGGTACATGCATCTCAGGATTTAAGTCTCACACACACCCAAAATCTGTTTTTCAGCTTCACCAGTTCCACTGAAAAGTATTCACAGCCCAGTGATTATGCCGTTAAGGAATGCTGGATATAGTGGTGTATTCTTTATATTTCAGCGtttgttgcaccattagggaaaCTATGGGTGCTTCTCCTGTTTACTGCTTGAGAAAGAGgatacactcttagaaataaaGATTCTAAGTACAAAGACATAGGGTTCGTGTCCCCacaagtcattaaaactcgtttttaaaccactccacaaatttcttgtgaacaaactatagttatggcaagttggttaggacatctactttgtgcatgacacaagtaattttttacaacaattgtttatggacagatgatttcacttataattcactgtatcacaattccagtgggtcagacgaaTGAaaacgctaagttgactgtgcctttaaacaacttggaaaattccagaagatgacgtcatgcctttagaagcttcgattaggctaattgacatcatttgagtcaattggaggtgtacctgtggatgtatttcaaggcataccttcaaactcagtacctctttgcttgacatcatgggaaaatctaaagaaatcagacaattgtagacctccacaagtctggttcattcttgggagcaatttccaaacgcctgaaggtaccacgttgatCCGTACAAACAAACGTGTGCAAgtaaaaacaccatgggacaacgcagctgtcacaccgctcaggaaggagacgtgttctgtctcctagagatgaacgtaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagattctggaggaaacaggtacaaaagtatctatatccacagtaaaacgagtcctatatcgacataacctgaaaggccactcaacaacagggaagccactgctccaaaaccaccatataaaagccagactacggtttgcaactgcacctgGGGATGAAGATCAcactttttggaggaatgtcctctggtctgatgaaacaaaactagaactgtttagccataatgaccatcattctgtttggaagaaaaagggggaggcttgcaagccgaagaacaccatccaaaccgtgaagaatgggggtggcagcatcatattgtgggggtgctttgctgcaggagggactggtgcacttcacaaaatagatctcATCATTTAGCAGGAAAATgttgttgatatattgaagcaacatctcaagacatcagtcaggaagttaaatcttgatTGCAAATGGGTcctcaaatggacaatgaccccaagcatacttccttCCAAAGTTgtcgcaaaatggcttaaggacaacaaagtcaaggtatttgagtgtccatcacaaagccacAAATTTGCAGGCAGAACTgcaaaagtgtgtgcgagcaaggaggccaacaaacctgactcagttacaccagctctgtcagggggaatgggccaaaattcccccaacttattgtgggaagcttgtggaaggctacccaaaacgtttgacccaagttaaacaattgaaaggcaatgctactatacactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaataaacacacaattctctctactattattctcacatttcacattcttaaaataaagggatcctaactgacgtaaAACAGGAAAATGTTtgctgggattaaatgtcaggaattttgaaaaaattagtttaaatgtacttggctaaggtgcatgtaaacttctgacttcaactgtatatagagtGTGTTAACAGGGTTTTAGGCCACCACGACCTGCCAggacagcttcaatgcgccttcgCATCGATACTAAGAATGGACTTAGTGCTCAGAGTAACAGCATATTAATAAATGTAGGAACTTGGCCGGAGGCTTAGCTACTAGCATTCAGTCCAGAAACAGTGACTTATTTGAGAGAAAGAGTTTCAATGTCCGTTATCTGATATCTCTTTGTCTTGATAGTTATTTTTACAGTTTTTTGTTTTCATCAATCTCTCTGTATCACCCCTCTGTCACTGGTTACACATTCCAAAGGGAAACTTCCCATCTCCGGGGAACAGAGTAATGTGAGGGAGTCATGTTTTTGCTGTGTATGCACTGTACTTTTGAATTCTATGTGTTCTTTTGTATTTACTGCTAGCCTTCTGGCCAGGTCTCCCTTTTCTGAACCCAAATGGGACTTtctggctaaataaaggttaaataaaaaatattataaaaGTAGCAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328233 False 3228 TUCP 0.39 2 67678862 67682122
TU328236 True 3209 lncRNA 0.39 2 67678862 67682122
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Neighbor

gene id symbol gene type direction distance location
LOC110504522 LOC106586570 coding upstream 75630 67599901 ~ 67603232 (+)
LOC118964316 NA coding upstream 156145 67521551 ~ 67522717 (+)
LOC110505416 LOC106586647 coding upstream 158700 67519326 ~ 67520162 (+)
LOC110520450 LOC106586636 coding upstream 174638 67461512 ~ 67504224 (+)
LOC110520449 LOC106586635 coding upstream 250490 67418016 ~ 67428372 (+)
LOC118936465 LOC106586642 coding downstream 44771 67726893 ~ 67734046 (+)
LOC110520459 LOC106586086 coding downstream 199294 67881416 ~ 67887339 (+)
LOC110520461 LOC100136473 coding downstream 262756 67944878 ~ 67980956 (+)
lrrc58b LOC106586648 coding downstream 300209 67982331 ~ 67989941 (+)
LOC110520463 LOC106586649 coding downstream 320183 68002305 ~ 68037956 (+)
G289476 NA non-coding upstream 14653 67660853 ~ 67664209 (+)
G289456 NA non-coding upstream 45467 67627013 ~ 67633395 (+)
G289452 NA non-coding upstream 50186 67622524 ~ 67628676 (+)
G289428 NA non-coding upstream 82260 67596398 ~ 67596602 (+)
G289156 NA non-coding upstream 132933 67545611 ~ 67545929 (+)
G289521 LOC106592868 non-coding downstream 97547 67779669 ~ 67874790 (+)
G289522 NA non-coding downstream 99811 67781933 ~ 67782612 (+)
G289523 NA non-coding downstream 101022 67783144 ~ 67783565 (+)
G289536 NA non-coding downstream 137363 67819485 ~ 67819927 (+)
G289455 NA other upstream 46652 67625353 ~ 67632210 (+)
G289116 NA other upstream 199933 67474973 ~ 67478929 (+)
LOC110520448 LOC106586634 other upstream 269312 67397151 ~ 67409646 (+)
G288674 NA other upstream 684731 66993171 ~ 66994131 (+)
G289517 NA other downstream 79615 67761737 ~ 67762423 (+)
G289883 NA other downstream 541603 68223725 ~ 68225306 (+)
LOC110520478 LOC106586673 other downstream 1944221 69625755 ~ 69635303 (+)
G291327 NA other downstream 2013273 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 2179938 69861894 ~ 69870212 (+)

Expression

G289486 Expression in all Baseline Samples

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G289486 Expression in each Bioproject

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G289486 Expression in each Sample
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Co-expression Network