G289653 (LOC106607871)



Basic Information


Item Value
gene id G289653
gene name LOC106607871
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67883752 ~ 67886232 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU328453
ATCAACGTTGAGGAAGGTGGTCTTGATCGCACTGTTGGACCGGGACCAGCCCCGCCGAAAGCGCAGGTCTGTGTGGATCCAGAGATGGTTAAAGTCCCGAAAGCAGGCAGGGGAATTCTACTGTCTAATTCAAGAGCTTCGACTGTTTTGAGAGGAATTCCGAAATTACTTTCGTCTGGACCGAAGCCAGTTCGATCACCTGCTCCAGATGGTTGGAGCCAGGATCACTGGATGGATACCAACTACCGGGAGTCCATCAGCCCAGTTGAACGCCTGCCAATTTGTCTTCGattcttggCAACAGGGGACTCCTACAGGACCATAGGATTCAGCTTCTGAGTTGGACGGTCCACGGTGGCAGGCATTGTCCCCTCTGTGGCGCAAGCCATTTGGGAGTGTCTGGCTGGTGAATACATGCCTGTCCTTAAGGAGGAAGACTGGAGGGCCATCGCTGCCGAGTTCCTGGAGAGGTGGAATTTCCCCAACTGTCTTGGCTCCATTGACGGGAAACATGTAGTAATCCAGGCTCCACCGTGCTCAGGTTCGCAATTCTACAACTACAAGGGTACATATTCAGTTGTACTCTTGGCTGTGGTAGATGCCATCTACTGTTTCCGTGTTGTCGATGTTGGTGCTTACGGCAAGGGAAGTGATGGCGGGACCCTCCGAGACTCTGCCTTTGGCCAGGCACTTCAGGATGGCACCCTGGATATTCCACCACCTGCATCACTCCCTGGGGCTGAAGACCTGGGACCTGTTCCCCACGTCTTCGTCGGCGATGAGGCCTTCCCTTTAAGACCCAACCTCATGAGGCCCTATGCTGGATGTTTTTACTTTCATATTGTCTTAGATCAGCAAAGGTGTAGGGAAGAAATAAGCAGATTAAGTC

Function


NR:

description
PREDICTED: uncharacterized protein LOC106607871

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU328453 True 889 TUCP 0.53 2 67883752 67886232

Neighbor


gene id symbol gene type direction distance location
LOC110520455 LOC106586642 coding downstream 2334 67836705 ~ 67881418 (-)
LOC118944713 LOC106592868 coding downstream 96903 67776411 ~ 67786849 (-)
LOC110520454 LOC106586643 coding downstream 177531 67685050 ~ 67706221 (-)
LOC110520453 LOC106586647 coding downstream 247094 67617490 ~ 67636658 (-)
LOC110520452 LOC106586638 coding downstream 315054 67545597 ~ 67568698 (-)
LOC110520458 LOC106586647 coding upstream 14124 67900356 ~ 67916858 (-)
nr1i2 nr1i2 coding upstream 239371 68125603 ~ 68147765 (-)
si:ch211-214p13.7 NA coding upstream 320098 68206330 ~ 68208674 (-)
LOC110520466 cd200 coding upstream 341040 68227272 ~ 68253241 (-)
LOC110520467 LOC106586653 coding upstream 392340 68278572 ~ 68292750 (-)
G289649 NA non-coding downstream 2374 67705034 ~ 67881378 (-)
G289716 NA non-coding downstream 75495 67753300 ~ 67808257 (-)
G289652 NA non-coding downstream 203585 67678862 ~ 67680167 (-)
G289677 NA non-coding downstream 251940 67625400 ~ 67631812 (-)
G289676 NA non-coding downstream 252543 67624211 ~ 67631209 (-)
G289754 NA non-coding upstream 37700 67923932 ~ 67924167 (-)
G289757 NA non-coding upstream 43239 67929471 ~ 67929673 (-)
G289759 NA non-coding upstream 45111 67931343 ~ 67931791 (-)
G289767 NA non-coding upstream 54544 67940776 ~ 67940975 (-)
G289678 NA other downstream 250259 67626832 ~ 67633493 (-)
G288578 NA other downstream 1040871 66842671 ~ 66842881 (-)
G287112 NA other downstream 2303257 65579791 ~ 65580495 (-)
G287042 NA other downstream 2436469 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 2583335 65298207 ~ 65300417 (-)
G290542 NA other upstream 692871 68579103 ~ 68580707 (-)
G290567 NA other upstream 740100 68626332 ~ 68647620 (-)
G290598 NA other upstream 824135 68710367 ~ 68717385 (-)
G290602 NA other upstream 835576 68721808 ~ 68724914 (-)

Expression



Co-expression Network