G289578


Basic Information

Item Value
gene id G289578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67927679 ~ 67927935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328351
aggccgcactgggTTCTACTGGTGAACTGGGGATACCGTGCgtagagctggcgcaggataACCCGGGCCGAAGAGTTGCACcagagaccaggagcgctgagccggcacaatcccTCCTGGCTGAATGCCAACTCTAGCACGGCAACTGCGGGGAGCTTGCAGAGAGCACACCGGGCTATGAGAGCACACTAGAGACTTGCGGCGCAGAGCCGCATAACCTGGAGCCTGACTAGTCACtctctccccacggtaagcat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328351 True 257 lncRNA 0.61 1 67927679 67927935

Neighbor

gene id symbol gene type direction distance location
LOC110520459 LOC106586086 coding upstream 40340 67881416 ~ 67887339 (+)
LOC118936465 LOC106586642 coding upstream 193633 67726893 ~ 67734046 (+)
LOC110504522 LOC106586570 coding upstream 324447 67599901 ~ 67603232 (+)
LOC118964316 NA coding upstream 404962 67521551 ~ 67522717 (+)
LOC110505416 LOC106586647 coding upstream 407517 67519326 ~ 67520162 (+)
LOC110520461 LOC100136473 coding downstream 16943 67944878 ~ 67980956 (+)
lrrc58b LOC106586648 coding downstream 54396 67982331 ~ 67989941 (+)
LOC110520463 LOC106586649 coding downstream 74370 68002305 ~ 68037956 (+)
LOC110504531 LOC106586650 coding downstream 130180 68058115 ~ 68114677 (+)
si:ch211-214p13.9 cd200r1 coding downstream 245713 68173648 ~ 68177773 (+)
G289574 NA non-coding upstream 3086 67924329 ~ 67924593 (+)
G289572 NA non-coding upstream 7714 67919699 ~ 67919965 (+)
G289563 LOC106586647 non-coding upstream 11241 67900738 ~ 67916438 (+)
G289544 NA non-coding upstream 91651 67827434 ~ 67836028 (+)
G289585 NA non-coding downstream 12847 67940782 ~ 67940983 (+)
G289586 NA non-coding downstream 14010 67941945 ~ 67942180 (+)
G289619 NA non-coding downstream 71164 67999099 ~ 67999378 (+)
G289645 NA non-coding downstream 104929 68032864 ~ 68033231 (+)
G289828 NA non-coding downstream 113194 68041129 ~ 68041899 (+)
G289517 NA other upstream 165256 67761737 ~ 67762423 (+)
G289486 NA other upstream 245557 67678862 ~ 67682122 (+)
G289455 NA other upstream 295469 67625353 ~ 67632210 (+)
G289116 NA other upstream 448750 67474973 ~ 67478929 (+)
G289883 NA other downstream 295790 68223725 ~ 68225306 (+)
LOC110520478 LOC106586673 other downstream 1698408 69625755 ~ 69635303 (+)
G291327 NA other downstream 1767460 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1934125 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1991247 69915810 ~ 69923807 (+)

Expression


Co-expression Network