G289585


Basic Information

Item Value
gene id G289585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67940782 ~ 67940983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328358
tatttaaccaggttggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggttggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggttggccagttgagaacacctttatttaaccaggtaggccagttgagaacaagttctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328358 True 202 lncRNA 0.42 1 67940782 67940983

Neighbor

gene id symbol gene type direction distance location
LOC110520459 LOC106586086 coding upstream 53443 67881416 ~ 67887339 (+)
LOC118936465 LOC106586642 coding upstream 206736 67726893 ~ 67734046 (+)
LOC110504522 LOC106586570 coding upstream 337550 67599901 ~ 67603232 (+)
LOC118964316 NA coding upstream 418065 67521551 ~ 67522717 (+)
LOC110505416 LOC106586647 coding upstream 420620 67519326 ~ 67520162 (+)
LOC110520461 LOC100136473 coding downstream 3895 67944878 ~ 67980956 (+)
lrrc58b LOC106586648 coding downstream 41348 67982331 ~ 67989941 (+)
LOC110520463 LOC106586649 coding downstream 61322 68002305 ~ 68037956 (+)
LOC110504531 LOC106586650 coding downstream 117132 68058115 ~ 68114677 (+)
si:ch211-214p13.9 cd200r1 coding downstream 232665 68173648 ~ 68177773 (+)
G289578 NA non-coding upstream 12847 67927679 ~ 67927935 (+)
G289574 NA non-coding upstream 16189 67924329 ~ 67924593 (+)
G289572 NA non-coding upstream 20817 67919699 ~ 67919965 (+)
G289563 LOC106586647 non-coding upstream 24344 67900738 ~ 67916438 (+)
G289586 NA non-coding downstream 962 67941945 ~ 67942180 (+)
G289619 NA non-coding downstream 58116 67999099 ~ 67999378 (+)
G289645 NA non-coding downstream 91881 68032864 ~ 68033231 (+)
G289828 NA non-coding downstream 100146 68041129 ~ 68041899 (+)
G289840 NA non-coding downstream 116074 68057057 ~ 68057280 (+)
G289517 NA other upstream 178359 67761737 ~ 67762423 (+)
G289486 NA other upstream 258660 67678862 ~ 67682122 (+)
G289455 NA other upstream 308572 67625353 ~ 67632210 (+)
G289116 NA other upstream 461853 67474973 ~ 67478929 (+)
G289883 NA other downstream 282742 68223725 ~ 68225306 (+)
LOC110520478 LOC106586673 other downstream 1685360 69625755 ~ 69635303 (+)
G291327 NA other downstream 1754412 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1921077 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1978199 69915810 ~ 69923807 (+)

Expression


Co-expression Network