G289881


Basic Information

Item Value
gene id G289881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68180062 ~ 68183196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328712
TTGATGCAACAACACCACAATTGAAGATGGCGAGAAGGAACTTCCTTATCCGCTGCAAACAGACTCTAAATGACTACACTCGGCTTCTGCTCTCCGATAATCCTGAACCTGATGCCCTTCAGTCCACGTTAACAAGgatccccattagctgttgccttgagcagctagtcttcctggggtccagcgaCATTATTAAGccctcctgcctgacctctacctgacctgagcctgcctgccgtcctgtgcctctactctactctggattatcgacccctacctgccttgacctgtcgtttgcctgcccctgttgctgtaatacacattgttacttcaacagtctgcatttgggtcttacctgaaacgtgatataagatgtgttttctattttt
>TU328716
TTGATGCAACAACACCACAATTGAAGATGGCGAGAAGGAACTTCCTTATCCGCTGCAAACAGACTCTAAATGACTACACTCGGCTTCTGCTCTCCGATAATCCTGAACCTGATGCCCTTCAGTCCACGTTAACAAGccctcctgcctgacctctacctgacctgagcctgcctgccgtcctgtgcctctactctactctggattatcgacccctacctgccttgacctgtcgtttgcctgcccctgttgctgtaatacacattgttacttcaacagtctgcatttgggtcttacctgaaacgtgatataagatgtgttttctattttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328712 False 389 lncRNA 0.48 4 68180062 68183196
TU328716 True 328 lncRNA 0.48 3 68180062 68183196

Neighbor

gene id symbol gene type direction distance location
si:ch211-214p13.9 cd200r1 coding upstream 2289 68173648 ~ 68177773 (+)
LOC110504531 LOC106586650 coding upstream 65385 68058115 ~ 68114677 (+)
LOC110520463 LOC106586649 coding upstream 142106 68002305 ~ 68037956 (+)
lrrc58b LOC106586648 coding upstream 190121 67982331 ~ 67989941 (+)
LOC110520461 LOC100136473 coding upstream 199106 67944878 ~ 67980956 (+)
LOC110520465 btla coding downstream 33089 68216285 ~ 68221416 (+)
si:ch73-390b10.2 gpr89 coding downstream 78218 68261414 ~ 68278415 (+)
LOC110504539 LOC106586655 coding downstream 141230 68324426 ~ 68365482 (+)
LOC118964318 NA coding downstream 151048 68334244 ~ 68337315 (+)
LOC110520472 LOC106586659 coding downstream 663312 68846508 ~ 68850315 (+)
G289840 NA non-coding upstream 122782 68057057 ~ 68057280 (+)
G289828 NA non-coding upstream 138163 68041129 ~ 68041899 (+)
G289645 NA non-coding upstream 146831 68032864 ~ 68033231 (+)
G289619 NA non-coding upstream 180684 67999099 ~ 67999378 (+)
G289586 NA non-coding upstream 237882 67941945 ~ 67942180 (+)
G289933 NA non-coding downstream 17485 68200681 ~ 68200909 (+)
G289883 NA non-coding downstream 40529 68223725 ~ 68225306 (+)
G290078 NA non-coding downstream 73265 68256461 ~ 68256755 (+)
G290082 NA non-coding downstream 75234 68258430 ~ 68258666 (+)
G290094 NA non-coding downstream 107475 68290671 ~ 68293010 (+)
G289517 NA other upstream 417639 67761737 ~ 67762423 (+)
G289486 NA other upstream 497940 67678862 ~ 67682122 (+)
G289455 NA other upstream 547852 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 660092 67519326 ~ 67520162 (+)
G289116 NA other upstream 701133 67474973 ~ 67478929 (+)
LOC110520478 LOC106586673 other downstream 1443147 69625755 ~ 69635303 (+)
G291327 NA other downstream 1512199 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1678864 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1735986 69915810 ~ 69923807 (+)

Expression


Co-expression Network