G290064


Basic Information

Item Value
gene id G290064
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68223448 ~ 68225334 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328921
ATGCTGTAATAACAACAAACGACCACATGGGGGCGGGCAGTAGCTGAAAGTAACACAGCATCAAGGTACAGTCAGTGGTTTGCTCTCAAAAAACACCTAGGTTACTTATTTATGGCTGAAAATGACTATCTTATAGACTAATACAAATCCATTACACTGATAAGAATGGGACCTCTTCTGAGATTGTTAGGCTAATGGATGTGTCAGCAATTATGACAATAATGTAATGGCATAATTAGGCTGAAGAGTTTGTATATTTTGTGTCTCAATAAGTTTTATAAGTCAAATCAGAAAACAAGACAACTTGCATTGGTTCGACACTGCCAGGATAATTTCAATAGTGCATCATCTCTGAGCATAGAGTTTCTCTCTGAATAAACATAATCTCTCTGAGCATAGtttctctctgaataaacacAATCTCTCTGAGCATAGAGTTTCTCTCTGAATAAACATAATCTCTCTGAGCATAGTTTCTCTCTGAATAAACATTATCTCTCTGAGCATAATTTCCCTCTGAATAAACATTATCTCTCTGAGCATAAtttctctctgaataaacacAATCTCTCTGAGCATAGAGTTTCTCTCTGAATAAACAGAATCTCTCTGAGCATAGAGTTTATCTCTGAATAAACATAATCTCTCTGAGCATAGAGTTTCCCTCTGAATAAACAATCTATTTGAGCATAGAGTTTCTGTCTGAATAAACAATCTATTTGAGCATAGAGTTTTCTCTGAATAAATGTCATCTCTCTGAGCATAGAGTTTATCTCTGAATAAACATTATCTCTCTGAGCATAATTTCTCTCTGAATAAACATTATCTCTCTGAGCATAATTTCCCTCTGAATAAACATTATCTCTCTGAGCATAATTTCTCTCTGAATAAACATAATCTCTCTGAGCATAGAGTATCTCTCTGAATAAACATAATCTCTCTGAGCATAGAGTATCTCTCTGAATAAACATAATCTCTCTGAGCATAGAGTTTCCCTCTGAATAAACAATCTATTTGAGCATAGAGTTTTCTCTGAATAAATGTCATCTCTAAGAGCATAGAGTTTCTCGCTGTCTTGGTGTGGTGGGCTGCTCCTAGCACTTCCTGTGCACTGTGTTTTTAAACCACAAGCACACAGCCTTGTGCAGGACAGGGTCTGTATCTGGTGCACAAAGAAAACCCCAGTACTTTACAGtaaccactcactcactcaggatTTTACCAGAACACATACAGAAGCAGTGTAGGGACCAAAGGCATTACCAGTGAGACAAGACCAAAGCTTCATTCTGCACTCTCAAAAACCAGCCATTCCTTCTTCATATGGTAATACTCTATGACTCTGTCACAATTTACAACACAATGAGGGACATCACTAGTCTCTggtgaatgtattgtaattgAGTTGAGCTGCATAGTGATCATGTAACCTTAATTTTAAATTGTTTCAAACTACTGTAACATGTTTCCAACCCAACAATAACTGAGACTAAAATGTGTCACTGTATGTTCTGCTTGATAACAATCACACCACACCAACATAACATCACAGTTACGCAAAGTATTACCGTCATCATCATATAGCCATAGAGAAACAGTCATCTTCATATAGCCATAGAGAAACAGTCATCTTCATATAGCCATAGAGAAACAGTCATCTTCACATAGCCATAGAGAAACAGTCATCTTCATATAGCCATAGAGAAATGTGTTTGCACGCCAGCACACGCTTGCTAACGTATTAACCTGTAGCCAGCACACGCTTGCTAACGTATAAACCTGTAGCCAGCACACGCTTGCTAACGTATTAACCTGTAGCCAGCACACGCTTGCTAACGTATTAACCTGTAG

Function

NR:

description
PREDICTED: calponin homology domain-containing protein DDB_G0272472 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328921 True 1851 lncRNA 0.38 2 68223448 68225334

Neighbor

gene id symbol gene type direction distance location
si:ch211-214p13.7 NA coding downstream 14774 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 75683 68125603 ~ 68147765 (-)
LOC110520458 LOC106586647 coding downstream 306590 67900356 ~ 67916858 (-)
LOC110520455 LOC106586642 coding downstream 342030 67836705 ~ 67881418 (-)
LOC118944713 LOC106592868 coding downstream 436599 67776411 ~ 67786849 (-)
LOC110520466 cd200 coding upstream 1938 68227272 ~ 68253241 (-)
LOC110520467 LOC106586653 coding upstream 53238 68278572 ~ 68292750 (-)
LOC110520470 LOC106586656 coding upstream 230127 68455461 ~ 68460579 (-)
LOC110520471 NA coding upstream 359138 68584472 ~ 68586742 (-)
LOC110520474 LOC106586664 coding upstream 1035169 69260503 ~ 69277276 (-)
G289985 NA non-coding downstream 129690 68093038 ~ 68093758 (-)
G289841 NA non-coding downstream 166163 68056985 ~ 68057285 (-)
G289836 NA non-coding downstream 172919 68050232 ~ 68050529 (-)
G289835 NA non-coding downstream 174794 68048367 ~ 68048654 (-)
G289826 NA non-coding downstream 185045 68038141 ~ 68038403 (-)
G290137 NA non-coding upstream 43119 68268453 ~ 68268667 (-)
G290144 NA non-coding upstream 59819 68285153 ~ 68285759 (-)
G290154 NA non-coding upstream 81716 68307050 ~ 68307310 (-)
G290155 NA non-coding upstream 82067 68307401 ~ 68307710 (-)
G290163 NA non-coding upstream 92939 68318273 ~ 68318828 (-)
G289653 LOC106607871 other downstream 337216 67883752 ~ 67886232 (-)
G289678 NA other downstream 589955 67626832 ~ 67633493 (-)
G288578 NA other downstream 1380567 66842671 ~ 66842881 (-)
G287112 NA other downstream 2642953 65579791 ~ 65580495 (-)
G290542 NA other upstream 353769 68579103 ~ 68580707 (-)
G290567 NA other upstream 400998 68626332 ~ 68647620 (-)
G290598 NA other upstream 485033 68710367 ~ 68717385 (-)
G290602 NA other upstream 496474 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 621277 68846611 ~ 68850854 (-)

Expression


Co-expression Network