G290078


Basic Information

Item Value
gene id G290078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68256461 ~ 68256755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU328939
CTGTAAAGGACTGCGTTAAATATTTAGAAATACATCTAGAGtagaagtcggaggtttacatacacgtaggttggagtcattaaaacttgtttttcaaccactccacaaatttcttgttaacaaactatagttttgtgcatgacacaagtgatttttccaacaattgtttactgacctaaaacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctagggtgtatgtaacttctgacttcaactgtatctaaaaATCACTTAGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU328939 True 295 lncRNA 0.33 1 68256461 68256755

Neighbor

gene id symbol gene type direction distance location
LOC110520465 btla coding upstream 35045 68216285 ~ 68221416 (+)
si:ch211-214p13.9 cd200r1 coding upstream 78688 68173648 ~ 68177773 (+)
LOC110504531 LOC106586650 coding upstream 141784 68058115 ~ 68114677 (+)
LOC110520463 LOC106586649 coding upstream 218505 68002305 ~ 68037956 (+)
lrrc58b LOC106586648 coding upstream 266520 67982331 ~ 67989941 (+)
si:ch73-390b10.2 gpr89 coding downstream 4659 68261414 ~ 68278415 (+)
LOC110504539 LOC106586655 coding downstream 67671 68324426 ~ 68365482 (+)
LOC118964318 NA coding downstream 77489 68334244 ~ 68337315 (+)
LOC110520472 LOC106586659 coding downstream 589753 68846508 ~ 68850315 (+)
LOC110504548 NA coding downstream 598017 68854772 ~ 68858737 (+)
G289883 NA non-coding upstream 31155 68223725 ~ 68225306 (+)
G289933 NA non-coding upstream 55552 68200681 ~ 68200909 (+)
G289881 NA non-coding upstream 73265 68180062 ~ 68183196 (+)
G289840 NA non-coding upstream 199181 68057057 ~ 68057280 (+)
G289828 NA non-coding upstream 214562 68041129 ~ 68041899 (+)
G290082 NA non-coding downstream 1675 68258430 ~ 68258666 (+)
G290094 NA non-coding downstream 33916 68290671 ~ 68293010 (+)
G290126 NA non-coding downstream 99484 68356239 ~ 68361416 (+)
G290110 NA non-coding downstream 115188 68371943 ~ 68372280 (+)
G290224 NA non-coding downstream 139272 68396027 ~ 68396383 (+)
G289517 NA other upstream 494038 67761737 ~ 67762423 (+)
G289486 NA other upstream 574339 67678862 ~ 67682122 (+)
G289455 NA other upstream 624251 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 736491 67519326 ~ 67520162 (+)
LOC110520478 LOC106586673 other downstream 1369588 69625755 ~ 69635303 (+)
G291327 NA other downstream 1438640 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1605305 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1662427 69915810 ~ 69923807 (+)
G291461 NA other downstream 1692912 69949667 ~ 69952168 (+)

Expression


Co-expression Network