G290144


Basic Information

Item Value
gene id G290144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68285153 ~ 68285759 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU329017
agtcagatccaataccacatttacatgagcagggatactggagtgatggaggtagatatgtatagaggtaaggtgacagggatactggagtgatggaggtagatatgcatgttaggtgacagggatactggagtgatggatgtagatatgtatagaggtaaggtgacagggatactggagtgatggaggtagatatgcatgttaggtgacagggatactggagtgatggaggtagatatgtacagaggTAAGGTGaaagggatactggagtgatggaggtagatatatatgttaggtgacagggatactggagtgatggaggtagatatgcatagaggtaaggtgacagggatactggagtgatggaggtagatatgtataggagaaaggggagagggatactttagtgatggaggtagatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacac
>TU329018
agtcagatccaataccacatttacatgagcagggatactggagtgatggaggtagatatgtatagaggtaaggtgacagggatactggagtgatggaggtagatatgcatgttaggtgacagggatactggagtgatggaggtagatatgtatagaggtaaggtgacagggatactggagtgatggaggtagatatgcatgttaggtgacagggatactggagtgatggaggtagatatgtacagaggTAAGGTGaaagggatactggagtgatggaggtagatatatatgttaggtgacagggatactggagtgatggaggtagatatgcatagaggtaaggtgacagggatactggagtgatggaggtagatatgtataggagaaaggggagagggatactttagtgatggaggtagatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU329017 False 517 lncRNA 0.44 2 68285153 68285759
TU329018 True 517 lncRNA 0.44 2 68285153 68285759

Neighbor

gene id symbol gene type direction distance location
LOC110520466 cd200 coding downstream 31912 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 76479 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 137388 68125603 ~ 68147765 (-)
LOC110520458 LOC106586647 coding downstream 368295 67900356 ~ 67916858 (-)
LOC110520455 LOC106586642 coding downstream 403735 67836705 ~ 67881418 (-)
LOC110520470 LOC106586656 coding upstream 169702 68455461 ~ 68460579 (-)
LOC110520471 NA coding upstream 298713 68584472 ~ 68586742 (-)
LOC110520474 LOC106586664 coding upstream 974744 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 1094708 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 1310078 69595837 ~ 69614655 (-)
G290137 NA non-coding downstream 16486 68268453 ~ 68268667 (-)
G290064 NA non-coding downstream 59819 68223448 ~ 68225334 (-)
G289985 NA non-coding downstream 191395 68093038 ~ 68093758 (-)
G289841 NA non-coding downstream 227868 68056985 ~ 68057285 (-)
G289836 NA non-coding downstream 234624 68050232 ~ 68050529 (-)
G290154 NA non-coding upstream 21291 68307050 ~ 68307310 (-)
G290155 NA non-coding upstream 21642 68307401 ~ 68307710 (-)
G290163 NA non-coding upstream 32514 68318273 ~ 68318828 (-)
G290190 NA non-coding upstream 79781 68365540 ~ 68366876 (-)
G290189 NA non-coding upstream 82385 68368144 ~ 68370857 (-)
G289653 LOC106607871 other downstream 398921 67883752 ~ 67886232 (-)
G289678 NA other downstream 651660 67626832 ~ 67633493 (-)
G288578 NA other downstream 1442272 66842671 ~ 66842881 (-)
G287112 NA other downstream 2704658 65579791 ~ 65580495 (-)
G290542 NA other upstream 293344 68579103 ~ 68580707 (-)
G290567 NA other upstream 340573 68626332 ~ 68647620 (-)
G290598 NA other upstream 424608 68710367 ~ 68717385 (-)
G290602 NA other upstream 436049 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 560852 68846611 ~ 68850854 (-)

Expression


Co-expression Network