G290189


Basic Information

Item Value
gene id G290189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68368144 ~ 68370857 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU329067
cccACAAACATTCTAGGGTAGAGTTCCCTTATGCTTCCATCGCCCCCTCGCAACTCAACTCCCATCGAACGGaatgagtcagacacacacaaacacacacacacaccacacacacacacacagacacatcaagacacacacacatgcttaagGCAATGGTGGCCTTGCGACTGGGACCATTCAAGTAGATCTAAATatgccctcctcctcttctctgccCCCAACACGTCATCCTCTTCCCCCTGCCTGCAGCACAAAGAGTCCACACAGACTCTTAGAAATACCCACAATGCTACACTCTACCCTACGTCACACAGACTTTAGACAGACAGTTCCCAAATGGAATATCCccaaagtttgaatgaatgcaaATCTACAAACCAAATTTAAAACTGTCTCTTAAACAGTATCTTGACTAACCTTATAATCTAACTATTGCACACACACGGACATCTAGAGTGCCAGATAGGAAGATATGAAGTATGGCGATAGAAAGCCATTCACAAAAagacgcatgcacatacacatacattcacacacacgcgcacacacacacacacagtcttgtcacacacacacacacactctgcaggaGTCTTGTTGGTCTGCATGCTGGAGTGAAGGGAAGGCAGTGCACTGTTGATACCCAGCCGGAGGGCATATCTGCCAGTGTGTTCTGACTGGTATTTACCGTGAGGAGAGCCCTCTAATCCCTAATCTGCCCATGGGAAACATGAACAGTAATTCAATAATATCCAAGAACAGCCAGCTTAACCCTGACACATAGCCTGCAATTCATCTGCATGATATTGACTGGAATGACTATTTCACTCCGTGTGTTTCTCTGTCAAACTGTATGACAACAAAATGACTAAAACTAGAAATATTATCCTCTGGCCTTCTACCATTGAAAATGAACATACACCATAGTTTTAATCCAAAAGTGTTCAGCTAATAGATCTCCAAAGCATTGAATTCTGGACTAGACAATACTAGTTCTGTGCCAGCCTATGTTGATTGGGAGGGACAACGAATCACCCTGTACAAAGTAAATTAATCATGCCGCGACAGCAGCAATCAGTCTAGCCGCTCATTATAAAAAGGTAAAAACTGAGATTAGGATTATACATGGGCAAAGTGTTTTAATCTGACACAGGGGCATCTCCTCTGTTAAAACAACCATGATGATCAATGACATGTTCCAGTGGAGAAGTGACAGGAGTGGCATCTCTAGCTCTCATTGATACTGACATAGAGGCTTGCTGACATCACATTATACAGCATTCCTGAGACAGATGCCACCAGTAATGGCATTAATATGTCCTgtcaatttgtgtgtgtgtgtatgtgagagagagacagagagagagagagagagagagagagagagagagagagacagagagagagagagagacagagagagacagagagagagagagagaccgcgcTCATTTACCTCTGTTTCAGGGTGTTCAACAGAATGATACCACCACTGGGATAGAGAGTAAGTctgtgttatttatctttgtacTAATCAATCCAAAGTGGAAATAGCTAGAGAGGTCATTTGAGCAGTACAGTGTGTTATGATTTGGTTGACATTTAGGAGTCCCCTTCCATTGGCTGAATCTGATGAATGGGAATGCTGCTCATTTTGGATGTGACAGACAGATCGGGATGATTCAGTTCCTCTCTCTCGCCCACACCATGCTGCCCTGGCTCTGCTCTGACATCTGGGTGACATCTGCTTAAAGTACATCCTCTCTCCAGCCTGTATGTCAGCCTGAAAACCCTCCCAGCTCACTGCTCTGCTCTCTCAGTCTGTCCCTGGATACACTCCAGGCTGAACTCTTCCCTCTGACTCTGACGTCTCTGCCACAGTTAGCAGAcgaagggggacagagagaaatgTTTGAGACAGAGAAGGTCAGTGGACAGATCTGAGTGCCTCAGGTGCTCTGAGAATGAGTAGTAATCAGTGAACAGTGTACGTCTGAGTAAAGCCTGGTGAaggttttgagtgtgactcctctccccctctctgccgcTCTCCCTGGAGGGGACGTTTTTGAACGCAACACCCTCTCTGTCTTTTTGCTGGAGGATAAGGAGGAACGGGAGAAGCAGATGCTCGTTAATCAGCAGAGAGAATGTTTagagtggaaaggagaggagaggagggggaaagagaagagaaggaaaggtGAATAGAAGACTGAGTAATTGTTTTGCAAGCCAAATAAACCCTGTCCTAAACACTCAGGCAGAGAAACCTTGTCCTATACTCTACAGTCATCCTCAAAGATGGTTGAAGGTCCCATGCCATCGAATCACCATCTCCTGACCCAGTCTCCTATATTAAGGCAAAGGTCTGTGTCGTGACTTCCCCCGAAggtggttcctctccttgttcgggcggtgctcggcggtcggcgTCGTTCAACAGCATGCGGCAGAACTGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU329067 True 2468 lncRNA 0.46 2 68368144 68370857

Neighbor

gene id symbol gene type direction distance location
LOC110520467 LOC106586653 coding downstream 75394 68278572 ~ 68292750 (-)
LOC110520466 cd200 coding downstream 114903 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 159470 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 220379 68125603 ~ 68147765 (-)
LOC110520458 LOC106586647 coding downstream 451286 67900356 ~ 67916858 (-)
LOC110520470 LOC106586656 coding upstream 84604 68455461 ~ 68460579 (-)
LOC110520471 NA coding upstream 213615 68584472 ~ 68586742 (-)
LOC110520474 LOC106586664 coding upstream 889646 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 1009610 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 1224980 69595837 ~ 69614655 (-)
G290190 NA non-coding downstream 1268 68365540 ~ 68366876 (-)
G290163 NA non-coding downstream 49316 68318273 ~ 68318828 (-)
G290155 NA non-coding downstream 60434 68307401 ~ 68307710 (-)
G290154 NA non-coding downstream 60834 68307050 ~ 68307310 (-)
G290144 NA non-coding downstream 82385 68285153 ~ 68285759 (-)
G290191 NA non-coding upstream 1100 68371957 ~ 68372339 (-)
G290209 NA non-coding upstream 16693 68387550 ~ 68387778 (-)
G290214 NA non-coding upstream 19511 68390368 ~ 68390634 (-)
G290221 NA non-coding upstream 24251 68395108 ~ 68395368 (-)
G290225 NA non-coding upstream 25186 68396043 ~ 68396242 (-)
G289653 LOC106607871 other downstream 481912 67883752 ~ 67886232 (-)
G289678 NA other downstream 734651 67626832 ~ 67633493 (-)
G288578 NA other downstream 1525263 66842671 ~ 66842881 (-)
G287112 NA other downstream 2787649 65579791 ~ 65580495 (-)
G290542 NA other upstream 208246 68579103 ~ 68580707 (-)
G290567 NA other upstream 255475 68626332 ~ 68647620 (-)
G290598 NA other upstream 339510 68710367 ~ 68717385 (-)
G290602 NA other upstream 350951 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 475754 68846611 ~ 68850854 (-)

Expression


Co-expression Network