G290443



Basic Information


Item Value
gene id G290443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68451802 ~ 68452782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU329336
GTGAATTCAGGGTCAGTTCATTTGACCTCATCATTTCCTTGCTGGTTCAACAGCCTGTTTTCCATAGGCCAACAGTAGATGGGAATCCTGACTATGTTTATTTCCAGCATGCAGTATACATTCTGAATTAAAAGTAGAAGAATGTCAGAGGAAGATTGAACCACTGGAAGACAGCTGAGGGTCACAGCAGATGCATAGGGATACAGTAGGCTCAGGTCTGCATGCGTccgtacatttgtgtgtgtgcctgtattaGAGGGGCTTTGGTGGATCACTAATTAGTCAGGTTCAGCCTAGAGCCAGTCTTCTCTGGAGACCTCATTAGCATGTCTGTGACCTTGTTTAGCGGAAACCTCCAGTCCTCAGATCCCCCAGGAGACACAATACTGAATTGCCCCATTAATAACTTCTTCATCTTCATGAGCACTAGATTACAGCATACATACACCTTCATCAGCATGACATCTCCATCAGCCTTACATTCCCTCATccctatagacctatatcagcATCacacctctatcctcccCTCATCCATATAGACctatatcagcATTACACCTACAATACTTCTGCACATCTGAAAATAATCTTCTAgtaaacagactcattctgtctgtccatctgagAGAGGAGTTAAAAAGAGAGAGACTAAgattcagagggagggagggtaggcttatgtaaaaaaataaaaatgagagAGGATGGTTGAGGATGGTTGACAAATCAAAATGAAGAACGTGGACCCTAGCCCAAAACCGAAATCAGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU329336 True 773 lncRNA 0.43 3 68451802 68452782

Neighbor


gene id symbol gene type direction distance location
LOC110520467 LOC106586653 coding downstream 159052 68278572 ~ 68292750 (-)
LOC110520466 cd200 coding downstream 198561 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 243128 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 304037 68125603 ~ 68147765 (-)
LOC110520458 LOC106586647 coding downstream 534944 67900356 ~ 67916858 (-)
LOC110520470 LOC106586656 coding upstream 2679 68455461 ~ 68460579 (-)
LOC110520471 NA coding upstream 131690 68584472 ~ 68586742 (-)
LOC110520474 LOC106586664 coding upstream 807721 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 927685 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 1143055 69595837 ~ 69614655 (-)
G290442 NA non-coding downstream 2745 68448646 ~ 68449057 (-)
G290454 NA non-coding downstream 15724 68435835 ~ 68436078 (-)
G290226 NA non-coding downstream 52435 68398958 ~ 68399367 (-)
G290225 NA non-coding downstream 55560 68396043 ~ 68396242 (-)
G290221 NA non-coding downstream 56434 68395108 ~ 68395368 (-)
G290477 NA non-coding upstream 17776 68470558 ~ 68470784 (-)
G290495 NA non-coding upstream 44453 68497235 ~ 68497484 (-)
G290496 LOC105030512 non-coding upstream 44850 68497632 ~ 68497870 (-)
G290501 NA non-coding upstream 50788 68503570 ~ 68503773 (-)
G289653 LOC106607871 other downstream 565570 67883752 ~ 67886232 (-)
G289678 NA other downstream 818309 67626832 ~ 67633493 (-)
G288578 NA other downstream 1608921 66842671 ~ 66842881 (-)
G287112 NA other downstream 2871307 65579791 ~ 65580495 (-)
G290542 NA other upstream 126321 68579103 ~ 68580707 (-)
G290567 NA other upstream 173550 68626332 ~ 68647620 (-)
G290598 NA other upstream 257585 68710367 ~ 68717385 (-)
G290602 NA other upstream 269026 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 393829 68846611 ~ 68850854 (-)

Expression



Co-expression Network