G290534



Basic Information


Item Value
gene id G290534
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68555217 ~ 68556102 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU329429
acataacgttttgcattgttgccaaaaagttcaatattggttgcatctgaacagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatgtctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagtgtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatagtatcgcttgcacagtgctccttgggatgtttaaaacttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttattcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatatggagacttgattacacacaggtggattgtatttatcatcattagtcatttagttcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatatcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcataagg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU329429 True 886 lncRNA 0.40 1 68555217 68556102

Neighbor


gene id symbol gene type direction distance location
LOC110520470 LOC106586656 coding downstream 94638 68455461 ~ 68460579 (-)
LOC110520467 LOC106586653 coding downstream 262467 68278572 ~ 68292750 (-)
LOC110520466 cd200 coding downstream 301976 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 346543 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 407452 68125603 ~ 68147765 (-)
LOC110520471 NA coding upstream 28370 68584472 ~ 68586742 (-)
LOC110520474 LOC106586664 coding upstream 704401 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 824365 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 1039735 69595837 ~ 69614655 (-)
LOC110520480 ube2al coding upstream 1085164 69641214 ~ 69644739 (-)
G290526 NA non-coding downstream 15420 68539416 ~ 68539797 (-)
G290520 NA non-coding downstream 27029 68527933 ~ 68528188 (-)
G290519 NA non-coding downstream 27708 68527281 ~ 68527509 (-)
G290518 NA non-coding downstream 28053 68526899 ~ 68527164 (-)
G290508 NA non-coding downstream 44478 68510384 ~ 68510739 (-)
G290539 NA non-coding upstream 17008 68573110 ~ 68573309 (-)
G290597 NA non-coding upstream 154911 68711013 ~ 68715853 (-)
G290599 NA non-coding upstream 166797 68722899 ~ 68727546 (-)
G290623 NA non-coding upstream 199308 68755410 ~ 68755852 (-)
G290672 NA non-coding upstream 258384 68814486 ~ 68814889 (-)
G289653 LOC106607871 other downstream 668985 67883752 ~ 67886232 (-)
G289678 NA other downstream 921724 67626832 ~ 67633493 (-)
G288578 NA other downstream 1712336 66842671 ~ 66842881 (-)
G287112 NA other downstream 2974722 65579791 ~ 65580495 (-)
G290542 NA other upstream 23001 68579103 ~ 68580707 (-)
G290567 NA other upstream 70230 68626332 ~ 68647620 (-)
G290598 NA other upstream 154265 68710367 ~ 68717385 (-)
G290602 NA other upstream 165706 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 290509 68846611 ~ 68850854 (-)

Expression



Co-expression Network