G290337


Basic Information

Item Value
gene id G290337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68565113 ~ 68565780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU329217
acaccacagagaaacagccACTGTCatgtcatcactactactgtcctaaactacagagaaacaaacattgtcaggtcatcatcactactactgtaatacaccacagagaaacaaacactgtcagatcatctctactactgtcctacaccacagagaaacagccACTGTCatgtcatcactactactgtcctaaactacagagaaacaaacattgtcaggtcatcatcactactactgtaatacaccacagagaaacaaacactgtcaggtcatcatcactactactgtccaaCACCACATAGAAACAGCCACTGTCATGTCATCAATACTACTGTccaacaccacagagaaacaaacactgtcagatcatctctactactgtcctacaccacagagaaacaaacactgtcaggtcatcagcactactactgtcctacaacacAGAGAAACAGCCACTGTCATGTCATCAATACTactgtcctaaactacagagaaacaaacattgtcaggtcatcatcactactactgtaatacaccacagagaaacaaacactgtcaggtcatctTCAATACTACTGCCAGAcatcacagagaaacaaacactgtcaggtcatcatcactactgtcctacaccacagagaaacaatgaCTGTCAGGTCATCATCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU329217 True 668 lncRNA 0.42 1 68565113 68565780
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110504539 LOC106586655 coding upstream 199631 68324426 ~ 68365482 (+)
LOC118964318 NA coding upstream 227798 68334244 ~ 68337315 (+)
si:ch73-390b10.2 gpr89 coding upstream 286698 68261414 ~ 68278415 (+)
LOC110520465 btla coding upstream 343697 68216285 ~ 68221416 (+)
si:ch211-214p13.9 cd200r1 coding upstream 387340 68173648 ~ 68177773 (+)
LOC110520472 LOC106586659 coding downstream 280728 68846508 ~ 68850315 (+)
LOC110504548 NA coding downstream 288992 68854772 ~ 68858737 (+)
LOC110504559 LOC106586663 coding downstream 376755 68942535 ~ 69172271 (+)
LOC110520475 LOC106586671 coding downstream 903996 69469776 ~ 69595798 (+)
LOC110520478 LOC106586673 coding downstream 1059975 69625755 ~ 69635303 (+)
G290335 NA non-coding upstream 2981 68561924 ~ 68562132 (+)
G290334 NA non-coding upstream 4019 68560866 ~ 68561094 (+)
G290332 NA non-coding upstream 6250 68558593 ~ 68558863 (+)
G290323 NA non-coding upstream 23528 68541291 ~ 68541585 (+)
G290312 NA non-coding upstream 38948 68525964 ~ 68526165 (+)
G290345 NA non-coding downstream 11957 68577737 ~ 68580803 (+)
G290382 NA non-coding downstream 61348 68627128 ~ 68647601 (+)
G290373 NA non-coding downstream 66316 68632096 ~ 68688289 (+)
G290376 NA non-coding downstream 89926 68655706 ~ 68674471 (+)
G290398 NA non-coding downstream 149643 68715423 ~ 68732910 (+)
G289883 NA other upstream 339807 68223725 ~ 68225306 (+)
G289517 NA other upstream 802690 67761737 ~ 67762423 (+)
G289486 NA other upstream 882991 67678862 ~ 67682122 (+)
G289455 NA other upstream 932903 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 1045143 67519326 ~ 67520162 (+)
G291327 NA other downstream 1129615 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1296280 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1353402 69915810 ~ 69923807 (+)
G291461 NA other downstream 1383887 69949667 ~ 69952168 (+)

Expression

G290337 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G290337 Expression in each Bioproject

Bar chart with 11 bars.
G290337 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network