G290686



Basic Information


Item Value
gene id G290686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68823052 ~ 68823271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU329605
CTCTTCACATGAATAAAGGAAGCTCTGCTCTAACTAACAATCATTAATGACTAAGGTTTCGTTTCTGGTCTGTGGAAAGGAGGTGTGAATGGTGAATAATGGGGATGTAGATAATTGCATTGGGGAAAGAGGCTATGGTTTCCTTATGCATGGCTGCAATCTGCTTGATTTaagttttgtatgggtcattatccttATTGTTAATGCACACCGAGAGAAC

Function


NR:

description
extensin-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU329605 True 220 lncRNA 0.40 1 68823052 68823271

Neighbor


gene id symbol gene type direction distance location
LOC110520471 NA coding downstream 236310 68584472 ~ 68586742 (-)
LOC110520470 LOC106586656 coding downstream 362473 68455461 ~ 68460579 (-)
LOC110520467 LOC106586653 coding downstream 530302 68278572 ~ 68292750 (-)
LOC110520466 cd200 coding downstream 569811 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 614378 68206330 ~ 68208674 (-)
LOC110520474 LOC106586664 coding upstream 437232 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 557196 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 772566 69595837 ~ 69614655 (-)
LOC110520480 ube2al coding upstream 817995 69641214 ~ 69644739 (-)
ankrd10b LOC106586677 coding upstream 826266 69649537 ~ 69675010 (-)
G290683 NA non-coding downstream 2182 68820595 ~ 68820870 (-)
G290676 NA non-coding downstream 5978 68816037 ~ 68817074 (-)
G290674 NA non-coding downstream 7414 68815330 ~ 68815638 (-)
G290673 NA non-coding downstream 7816 68815012 ~ 68815236 (-)
G290672 NA non-coding downstream 8163 68814486 ~ 68814889 (-)
G290706 NA non-coding upstream 21515 68844786 ~ 68845063 (-)
G290714 NA non-coding upstream 28607 68851878 ~ 68853389 (-)
G290715 NA non-coding upstream 30174 68853445 ~ 68854358 (-)
G290954 NA non-coding upstream 91483 68914754 ~ 68915505 (-)
G291010 NA non-coding upstream 206209 69029480 ~ 69030775 (-)
G290602 NA other downstream 98138 68721808 ~ 68724914 (-)
G290598 NA other downstream 105667 68710367 ~ 68717385 (-)
G290567 NA other downstream 175432 68626332 ~ 68647620 (-)
G290542 NA other downstream 242345 68579103 ~ 68580707 (-)
G290713 LOC106586659 other upstream 23340 68846611 ~ 68850854 (-)
G291138 NA other upstream 432734 69256005 ~ 69256544 (-)
G291901 LOC106586687 other upstream 1157075 69980346 ~ 69996605 (-)
G291977 NA other upstream 1284269 70107540 ~ 70107950 (-)
G292753 NA other upstream 1896765 70720036 ~ 70720591 (-)

Expression



Co-expression Network