G290871


Basic Information

Item Value
gene id G290871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69161065 ~ 69161266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU329840
attcaggccaaatagttcaatcctgatttcatcacaccagataatcttgtttctcatggtctgagagtccttttggcaaactcctagcaggctgtcatttgccttatactgaggagtggcttccatctaccataaaggcctgattggtagagtgctgcagagatgattgtctttCTAGAAGGtcctcccatcttcacagagg

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU329840 True 202 lncRNA 0.45 1 69161065 69161266

Neighbor

gene id symbol gene type direction distance location
LOC110504548 NA coding upstream 302328 68854772 ~ 68858737 (+)
LOC110520472 LOC106586659 coding upstream 310750 68846508 ~ 68850315 (+)
LOC110504539 LOC106586655 coding upstream 795583 68324426 ~ 68365482 (+)
LOC118964318 NA coding upstream 823750 68334244 ~ 68337315 (+)
si:ch73-390b10.2 gpr89 coding upstream 882650 68261414 ~ 68278415 (+)
LOC110520475 LOC106586671 coding downstream 308510 69469776 ~ 69595798 (+)
LOC110520478 LOC106586673 coding downstream 464489 69625755 ~ 69635303 (+)
LOC110520479 LOC106586674 coding downstream 473314 69634580 ~ 69640723 (+)
LOC118964360 NA coding downstream 515244 69676510 ~ 69676663 (+)
LOC110504569 rpgr coding downstream 551082 69712348 ~ 69731657 (+)
G290870 NA non-coding upstream 1284 69159577 ~ 69159781 (+)
G290868 NA non-coding upstream 7350 69153507 ~ 69153715 (+)
G290867 NA non-coding upstream 8115 69152563 ~ 69152950 (+)
G290782 NA non-coding upstream 176730 68980596 ~ 68984335 (+)
G290909 NA non-coding downstream 79261 69240527 ~ 69241556 (+)
G290919 NA non-coding downstream 94093 69255359 ~ 69255583 (+)
G290920 NA non-coding downstream 94685 69255951 ~ 69256215 (+)
G290921 NA non-coding downstream 95344 69256610 ~ 69256850 (+)
G290925 NA non-coding downstream 99263 69260529 ~ 69264353 (+)
G289883 NA other upstream 935759 68223725 ~ 68225306 (+)
G289517 NA other upstream 1398642 67761737 ~ 67762423 (+)
G289486 NA other upstream 1478943 67678862 ~ 67682122 (+)
G289455 NA other upstream 1528855 67625353 ~ 67632210 (+)
LOC110505416 LOC106586647 other upstream 1641095 67519326 ~ 67520162 (+)
G291327 NA other downstream 534129 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 700794 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 757916 69915810 ~ 69923807 (+)
G291461 NA other downstream 788401 69949667 ~ 69952168 (+)

Expression


Co-expression Network