G291749



Basic Information


Item Value
gene id G291749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69714230 ~ 69716414 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU330812
ggtatagaggaagagagatagagaggtatagaggaagagagatagagaggtgtagaggaagagagaggtagaggtgtagaggaagagatagagaggtgtatgggaagagagagatagaggtgtagaggaagagagagatagaggtgtagaggaagagagagatagagagatagagaagtatagaggaagagagagatagagaggtatagcgagagatagagaggtgtagAGGAAGGGGAGACAGTCACAAACTGGAAACAGTAGAC
>TU330813
agaggaagcaagagagagaaagagagagagagagaggtatagaggaagagagagaggtatagaggaagatagagaggtatagaggaagagagagaggtatagaggaagagagagaggtatagaggaagagagagaggtttataggaagagagagatagagaggtataaaggaagagagagatagagaggtatagaggaagagagagatagagaggtatagaggaagagaggtatagaggaagatagagagagaggtatagagaaggagagagatagagaggtgtagaggaagagagagatagagagatagagatagagaggtgtagaggaagagagagatagagagatagagaggtatagaggaagagagagatagagaggtgtagaggaagagagagatagagaggtgtcgaggaagagagagagagaagtatagaggaagagaggaagagagagagagaagtatagaggaagagagaaagagagatagagaagtatagaggaagagagagatagagaggtatagcgagagatagagaggtgtagAGGAAGGGGAGACAGTCACAAACTGGAAACAGTAGAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU330812 False 266 lncRNA 0.45 3 69714230 69714857
TU330813 True 583 lncRNA 0.44 4 69714230 69716414

Neighbor


gene id symbol gene type direction distance location
otc otc coding downstream 5061 69698465 ~ 69709169 (-)
ankrd10b LOC106586677 coding downstream 39220 69649537 ~ 69675010 (-)
LOC110520480 ube2al coding downstream 69491 69641214 ~ 69644739 (-)
LOC110520477 LOC106586672 coding downstream 99575 69595837 ~ 69614655 (-)
LOC110520476 LOC106586666 coding downstream 244532 69380467 ~ 69469698 (-)
sytl5 sytl5 coding upstream 59218 69775632 ~ 69861001 (-)
xk xk coding upstream 159508 69871658 ~ 69903855 (-)
LOC110520487 NA coding upstream 176537 69892951 ~ 69895131 (-)
LOC110504590 lancl3 coding upstream 190891 69907305 ~ 69911161 (-)
asb11 LOC106586685 coding upstream 211247 69927661 ~ 69933360 (-)
G291662 LOC106586674 non-coding downstream 73536 69639833 ~ 69640694 (-)
G291652 NA non-coding downstream 114521 69522755 ~ 69599709 (-)
G291661 col4a2 non-coding downstream 120152 69591159 ~ 69594078 (-)
G291631 NA non-coding downstream 206283 69499580 ~ 69507947 (-)
G291755 NA non-coding upstream 11819 69728233 ~ 69729053 (-)
G291760 NA non-coding upstream 16906 69733320 ~ 69733532 (-)
G291763 LOC106581772 non-coding upstream 22095 69738509 ~ 69738762 (-)
G291764 NA non-coding upstream 24802 69741216 ~ 69741664 (-)
G291766 NA non-coding upstream 27430 69743844 ~ 69744143 (-)
G291138 NA other downstream 457686 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 863376 68846611 ~ 68850854 (-)
G290602 NA other downstream 989316 68721808 ~ 68724914 (-)
G290598 NA other downstream 996845 68710367 ~ 68717385 (-)
G290567 NA other downstream 1066610 68626332 ~ 68647620 (-)
G291901 LOC106586687 other upstream 263932 69980346 ~ 69996605 (-)
G291977 NA other upstream 391126 70107540 ~ 70107950 (-)
G292753 NA other upstream 1003622 70720036 ~ 70720591 (-)
G292919 NA other upstream 1311205 71027619 ~ 71040152 (-)
G293984 NA other upstream 2186900 71903314 ~ 71903908 (-)

Expression



Co-expression Network