G291763 (LOC106581772)



Basic Information


Item Value
gene id G291763
gene name LOC106581772
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69738509 ~ 69738762 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU330830
tgtgtctctggtgcgcaaggttcttgggcgactgctggagcatgacctatatgtGAAGGTggagaaatgtgagttttccaaacgagccgtttccttcctgggttatcgcatttccacctcaggggtggtAATGGAGTGTGACCGCGGCAAGGCCGTGCGTAATTAGCCGACTCCggccacggtaaaggaggtgcagcagatcttagggtttgccaattactaccggaggtttatctggggttttggtcaggtag

Function


NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU330830 True 254 lncRNA 0.53 1 69738509 69738762

Neighbor


gene id symbol gene type direction distance location
otc otc coding downstream 29340 69698465 ~ 69709169 (-)
ankrd10b LOC106586677 coding downstream 63499 69649537 ~ 69675010 (-)
LOC110520480 ube2al coding downstream 93770 69641214 ~ 69644739 (-)
LOC110520477 LOC106586672 coding downstream 123854 69595837 ~ 69614655 (-)
LOC110520476 LOC106586666 coding downstream 268811 69380467 ~ 69469698 (-)
sytl5 sytl5 coding upstream 36870 69775632 ~ 69861001 (-)
xk xk coding upstream 137160 69871658 ~ 69903855 (-)
LOC110520487 NA coding upstream 154189 69892951 ~ 69895131 (-)
LOC110504590 lancl3 coding upstream 168543 69907305 ~ 69911161 (-)
asb11 LOC106586685 coding upstream 188899 69927661 ~ 69933360 (-)
G291760 NA non-coding downstream 4977 69733320 ~ 69733532 (-)
G291755 NA non-coding downstream 9456 69728233 ~ 69729053 (-)
G291749 NA non-coding downstream 22095 69714230 ~ 69716414 (-)
G291662 LOC106586674 non-coding downstream 97815 69639833 ~ 69640694 (-)
G291764 NA non-coding upstream 2454 69741216 ~ 69741664 (-)
G291766 NA non-coding upstream 5082 69743844 ~ 69744143 (-)
G291767 NA non-coding upstream 5787 69744549 ~ 69744843 (-)
G291773 NA non-coding upstream 17684 69756446 ~ 69756694 (-)
G291775 NA non-coding upstream 18846 69757608 ~ 69757867 (-)
G291138 NA other downstream 481965 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 887655 68846611 ~ 68850854 (-)
G290602 NA other downstream 1013595 68721808 ~ 68724914 (-)
G290598 NA other downstream 1021124 68710367 ~ 68717385 (-)
G290567 NA other downstream 1090889 68626332 ~ 68647620 (-)
G291901 LOC106586687 other upstream 241584 69980346 ~ 69996605 (-)
G291977 NA other upstream 368778 70107540 ~ 70107950 (-)
G292753 NA other upstream 981274 70720036 ~ 70720591 (-)
G292919 NA other upstream 1288857 71027619 ~ 71040152 (-)
G293984 NA other upstream 2164552 71903314 ~ 71903908 (-)

Expression



Co-expression Network