G291353


Basic Information

Item Value
gene id G291353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69740538 ~ 69740934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU330361
GAGTcagggtgtgggtgtgggtgtgggtgtggagtcaggcgcaggagaaacaAGCGCGTATTATTAAACAAGCTCAAAATAACAGGAATACCGGACTACAACAGTAACCACAAAACCCCACTCAGACACAGTCCAGGCAAAAACCACCTGTTAAAAATGAACTAAAGAAAACGCAACCCAAAACTCACTGACAGTCAAacgaaaacaatcccgcacaaaaaccCAAAGGAAATGTCGAGATAAATACCCCCCCAATTAACCAAAATGAAACCaggtgaaacacaaaacagacataaccaaaagaaaaggaaaaaggatcggtggcagctagtagaccggcgacgaccgccgagcgccgcccgaacagcgagaggagccaccttcggtggaagtcgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU330361 True 397 lncRNA 0.48 1 69740538 69740934

Neighbor

gene id symbol gene type direction distance location
LOC110504569 rpgr coding upstream 8881 69712348 ~ 69731657 (+)
LOC118964360 NA coding upstream 63875 69676510 ~ 69676663 (+)
LOC110520479 LOC106586674 coding upstream 99815 69634580 ~ 69640723 (+)
LOC110520478 LOC106586673 coding upstream 105235 69625755 ~ 69635303 (+)
LOC110520475 LOC106586671 coding upstream 144740 69469776 ~ 69595798 (+)
LOC110520485 dynlt3 coding downstream 120960 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 coding downstream 174876 69915810 ~ 69923807 (+)
LOC110520491 LOC106586687 coding downstream 239334 69980268 ~ 70034765 (+)
LOC110520493 LOC106586690 coding downstream 316449 70057383 ~ 70070470 (+)
LOC110520495 LOC106586691 coding downstream 331870 70072804 ~ 70092807 (+)
G291345 NA non-coding upstream 19752 69720008 ~ 69720786 (+)
G291331 NA non-coding upstream 38818 69699748 ~ 69701720 (+)
G291326 NA non-coding upstream 46289 69694015 ~ 69694249 (+)
G291163 NA non-coding upstream 98508 69563664 ~ 69642030 (+)
G291274 NA non-coding upstream 203280 69534421 ~ 69537258 (+)
G291354 NA non-coding downstream 46 69740980 ~ 69741802 (+)
G291356 NA non-coding downstream 3310 69744244 ~ 69744512 (+)
G291357 NA non-coding downstream 4257 69745191 ~ 69745409 (+)
G291362 NA non-coding downstream 11905 69752839 ~ 69753077 (+)
G291365 NA non-coding downstream 16281 69757215 ~ 69757418 (+)
G291327 NA other upstream 44702 69695395 ~ 69695836 (+)
G289883 NA other upstream 1515232 68223725 ~ 68225306 (+)
G289517 NA other upstream 1978115 67761737 ~ 67762423 (+)
G289486 NA other upstream 2058416 67678862 ~ 67682122 (+)
G291461 NA other downstream 208733 69949667 ~ 69952168 (+)
LOC110520507 senp7 other downstream 836184 70576887 ~ 70597458 (+)

Expression


Co-expression Network