G291728


Basic Information

Item Value
gene id G291728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69770830 ~ 69772552 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU330790
GGATATATATTGGGTATATTTTAGTATAGACATTaccattgagggcttccatcattttaaagtagtcagCTGGATGGGGATTCTTATGGGTTGGGAGCATTGTCTTCTTCAAATTGAGTTGCCTATGGTTTGTAAACCAAAGACTAAGGTCTTGTCCGAGAGCATGAGCCAAGACCAAGATTTAAACCAGGACATTGGTCCCAAGATCCATACCCAGGGAGTTGAGACCATGACAAGTTAAATACATAATGTATGTGGACTTGAGTGGTCTCAAGACCAAGACCACAAGACTCCATGGGCCCTTTCTTCAATTCTAAGAAACTTGAGTggagtaaagtagagtatagttcactgtagtactgtatagtacagtagagaagagtacagtacagcacagcacattatagacgtctatgtttgggcTCTTTTTTCCTGAAGTGTGCTCTTGACCACTACCTACATGGTTGCTCAGGATGTATAGCATGGCGCTTGCAAatttaaaatggagatagcctcaatggtgctgcctGTGCTGGCACAGATGTCATGCTGGCACAGATGCCATAATGGCACAGATATAAAGATGAGACCTCTATCAATCTCTATGGTGTCAATTGTTTCAGTTGTGACTGCTTTGGTTGGACAATTTAGACTTTTGGACAGATGTACTtcccaccaaacacatacatacatatttcTGGAAATATTAGATGTTGAGTAGTGAAGCGTCTTCTTATAAATACATGAAGATTTATTAAACCTGCTCACAAATTTGATCCAAAATGTTTGCAGACAGACTACTCACTATGTGGCCATGCTAGAGAGGGGTGCAATCCCATCAGCTGGAGATATATGTAGGGGTGTGGCTTAATGCAGATTCATTCTACAGtcttttaatgtgtgtgttttatcagtcTTTTAACGGTAGTGACATCAAAAGGTGGGCCAGCATTTTTTTGAGAAgtatgttttaaaataaacaaatctactaattataccAGTATCTTTCAATGTCATAATAGAACAACTCAAGATGTTCTGTTGAAATAATAATACTAAAACTATTTTAAAAAATTATGAATTGCTTTATTTTCAAACATGAAGTTTAAGAGTCAGTGTGTAAGACAGACATCTCTCAATAGAAACAAGTATATAAACAATGACTTTGTACTATATTAATTGAAAAATATGTTTGTTATTCCCTTGAAGTGAATTAGAATATATCATGATGTAATGAAATGTCCTAAGTTTGGAGACTTAAATGTTTTTCTAAAtcgtttatttttcatttttaagTGGGACAGCAATTTACAACACTTCTGTAGAATACCCCAAATACTCTATAGGGAAAAGGATGCTATTTGGGCTGCAGACTTGGTCTCGGTGTCACAGCCCACTGTCACAACCTACAGTCTACTGTGGAATGCAAGTCTACATAAACAACCATTGAAAACTACAgaatacagtaataataatactattaaaATGGCATTTACTGTGTAGATGAGTTGCGGGCAATACCCTGCTACTGAAGAAACACTAGACGTGTCTGACagcatgttactgtctctgtTTTAATGTCCTCTCATTCAAAAGTAGATTGTTCGATTTGACATGGCAATGTGACTGAATCAATCTCatctggttttaaatgttttaccggAATCTTTTGAAGAAATAAACAACACATATCATTCCTCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU330790 True 1701 lncRNA 0.37 2 69770830 69772552

Neighbor

gene id symbol gene type direction distance location
otc otc coding downstream 61661 69698465 ~ 69709169 (-)
ankrd10b LOC106586677 coding downstream 95820 69649537 ~ 69675010 (-)
LOC110520480 ube2al coding downstream 126091 69641214 ~ 69644739 (-)
LOC110520477 LOC106586672 coding downstream 156175 69595837 ~ 69614655 (-)
LOC110520476 LOC106586666 coding downstream 301132 69380467 ~ 69469698 (-)
sytl5 sytl5 coding upstream 3080 69775632 ~ 69861001 (-)
xk xk coding upstream 103370 69871658 ~ 69903855 (-)
LOC110520487 NA coding upstream 120399 69892951 ~ 69895131 (-)
LOC110504590 lancl3 coding upstream 134753 69907305 ~ 69911161 (-)
asb11 LOC106586685 coding upstream 155109 69927661 ~ 69933360 (-)
G291775 NA non-coding downstream 12963 69757608 ~ 69757867 (-)
G291773 NA non-coding downstream 14136 69756446 ~ 69756694 (-)
G291767 NA non-coding downstream 25987 69744549 ~ 69744843 (-)
G291766 NA non-coding downstream 26687 69743844 ~ 69744143 (-)
G291764 NA non-coding downstream 29166 69741216 ~ 69741664 (-)
G291783 NA non-coding upstream 12539 69785091 ~ 69785402 (-)
G291785 NA non-coding upstream 13803 69786355 ~ 69786677 (-)
G291788 NA non-coding upstream 17760 69790312 ~ 69790715 (-)
G291789 NA non-coding upstream 18207 69790759 ~ 69791033 (-)
G291791 NA non-coding upstream 22382 69794934 ~ 69795135 (-)
G291138 NA other downstream 514286 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 919976 68846611 ~ 68850854 (-)
G290602 NA other downstream 1045916 68721808 ~ 68724914 (-)
G290598 NA other downstream 1053445 68710367 ~ 68717385 (-)
G290567 NA other downstream 1123210 68626332 ~ 68647620 (-)
G291901 LOC106586687 other upstream 207794 69980346 ~ 69996605 (-)
G291977 NA other upstream 334988 70107540 ~ 70107950 (-)
G292753 NA other upstream 947484 70720036 ~ 70720591 (-)
G292919 NA other upstream 1255067 71027619 ~ 71040152 (-)
G293984 NA other upstream 2130762 71903314 ~ 71903908 (-)

Expression


Co-expression Network