G292252


Basic Information

Item Value
gene id G292252
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70209567 ~ 70210180 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU331398
gtactccagcactattgaaattgttttgtctctgtactccagcactattgaaattgttttgtctctgtactccagcactattgaaattgttttgtctctgtactccagcactattgaaattgttttggctctgtactccagcactattgaaattgttttggctctgtactccagcactattGAAATTGTTTTGTCTCTGTAATCCAGCACTATTGAaattgttttggctctgtactccagcactattgaaattgttttgtctctgtactccagcactattgaaattgttttgtctctgtactccagcactattgaaattgttttggctctgtactccagcactatttcaattgttttggctctgtactccagcactattgaaattgttttggctctgtactccagcactattgaaattgttttgtctctgtactccagcactattTCAATTgatttggctctgtactccagcactattGAAATTGTTTTGGCTCGGTACTCCAGCACTATTGAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597945, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331398 True 515 lncRNA 0.38 2 70209567 70210180

Neighbor

gene id symbol gene type direction distance location
LOC110520496 LOC106586692 coding downstream 74035 70125298 ~ 70135532 (-)
LOC110520492 LOC106586689 coding downstream 161174 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 238394 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 270711 69933697 ~ 69938856 (-)
asb11 LOC106586685 coding downstream 276207 69927661 ~ 69933360 (-)
LOC118964359 NA coding upstream 10150 70220330 ~ 70220464 (-)
LOC110520510 tfg coding upstream 560976 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 597169 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 600424 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 686329 70896509 ~ 70907574 (-)
G292211 NA non-coding downstream 45558 70122859 ~ 70164009 (-)
G292215 NA non-coding downstream 80443 70128581 ~ 70129124 (-)
G292214 NA non-coding downstream 88838 70120408 ~ 70120729 (-)
G291884 LOC106586687 non-coding downstream 174804 70030764 ~ 70034763 (-)
G291896 NA non-coding downstream 237642 69971661 ~ 69971925 (-)
G292256 NA non-coding upstream 5219 70215399 ~ 70215747 (-)
G292272 NA non-coding upstream 33689 70243869 ~ 70252589 (-)
G292274 NA non-coding upstream 38005 70248185 ~ 70248966 (-)
G292277 NA non-coding upstream 73476 70283656 ~ 70284188 (-)
G292286 NA non-coding upstream 86295 70296475 ~ 70296816 (-)
G291977 NA other downstream 101617 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 212962 69980346 ~ 69996605 (-)
G291138 NA other downstream 953023 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1358713 68846611 ~ 68850854 (-)
G290602 NA other downstream 1484653 68721808 ~ 68724914 (-)
G292753 NA other upstream 509856 70720036 ~ 70720591 (-)
G292919 NA other upstream 817439 71027619 ~ 71040152 (-)
G293984 NA other upstream 1693134 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1962869 72121974 ~ 72206818 (-)
G294451 NA other upstream 2361069 72571249 ~ 72575432 (-)

Expression


Co-expression Network