G292277



Basic Information


Item Value
gene id G292277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70283656 ~ 70284188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU331434
TCAAAAGGTTCATCAAAAGGTTCatcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcatCAAAAGGTTATTTGAGGATCCATTTAAAAGGGTTCTTCtaatggctaatttaggaaagggccaatgctagctagctagccaccggaggacaacaacacaacgagatgcaacaattcaagttgtttctgtcaataaCATATTGCTctcgatgtgatgtgattggagCCAAATCCAAAt
>TU331435
ATTTTACTCAAAAGGTTCATCAAAAGGTTCatcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcttcaaaaggttcttcaaaaggttcatcaaaaggttcttcaaaaggttcatCAAAAGGTTATTTGAGGATCCATTTAAAAGGGTTCTTCtaatggctaatttaggaaagggccaatgctagctagctagccaccggaggacaacaacacaacgagatgcaacaattcaagttgtttctgtcaataaCATATTGCTctcgatgtgatgtgattggagCCAAATCCAAAt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU331434 False 310 lncRNA 0.37 2 70283656 70284013
TU331435 True 329 lncRNA 0.36 3 70283656 70284188

Neighbor


gene id symbol gene type direction distance location
LOC118964359 NA coding downstream 63192 70220330 ~ 70220464 (-)
LOC110520496 LOC106586692 coding downstream 148124 70125298 ~ 70135532 (-)
LOC110520492 LOC106586689 coding downstream 235263 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 312483 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 344800 69933697 ~ 69938856 (-)
LOC110520510 tfg coding upstream 486968 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 523161 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 526416 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 612321 70896509 ~ 70907574 (-)
tmem30c LOC106586702 coding upstream 660846 70945034 ~ 70950599 (-)
G292272 NA non-coding downstream 31067 70243869 ~ 70252589 (-)
G292274 NA non-coding downstream 34690 70248185 ~ 70248966 (-)
G292256 NA non-coding downstream 67909 70215399 ~ 70215747 (-)
G292252 NA non-coding downstream 73476 70209567 ~ 70210180 (-)
G292211 NA non-coding downstream 119647 70122859 ~ 70164009 (-)
G292286 NA non-coding upstream 12287 70296475 ~ 70296816 (-)
G292294 NA non-coding upstream 26547 70310735 ~ 70311012 (-)
G292295 NA non-coding upstream 26924 70311112 ~ 70311344 (-)
G292300 NA non-coding upstream 31422 70315610 ~ 70315895 (-)
G292313 NA non-coding upstream 61339 70345527 ~ 70346693 (-)
G291977 NA other downstream 175706 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 287051 69980346 ~ 69996605 (-)
G291138 NA other downstream 1027112 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1432802 68846611 ~ 68850854 (-)
G290602 NA other downstream 1558742 68721808 ~ 68724914 (-)
G292753 NA other upstream 435848 70720036 ~ 70720591 (-)
G292919 NA other upstream 743431 71027619 ~ 71040152 (-)
G293984 NA other upstream 1619126 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1888861 72121974 ~ 72206818 (-)
G294451 NA other upstream 2287061 72571249 ~ 72575432 (-)

Expression



Co-expression Network