Gene
RNA
| Item | Value |
|---|---|
| gene id | G292300 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 70315610 ~ 70315895 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable ATP-dependent RNA helicase DDX27 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU331458 | True | 286 | lncRNA | 0.49 | 1 | 70315610 | 70315895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964359 | NA | coding | downstream | 95146 | 70220330 ~ 70220464 (-) |
| LOC110520496 | LOC106586692 | coding | downstream | 180078 | 70125298 ~ 70135532 (-) |
| LOC110520492 | LOC106586689 | coding | downstream | 267217 | 70035040 ~ 70048393 (-) |
| LOC110520490 | LOC106586686 | coding | downstream | 344437 | 69949665 ~ 69971173 (-) |
| piga | LOC106586684 | coding | downstream | 376754 | 69933697 ~ 69938856 (-) |
| LOC110520510 | tfg | coding | upstream | 455261 | 70771156 ~ 70806540 (-) |
| jagn1a | LOC106586704 | coding | upstream | 491454 | 70807349 ~ 70810049 (-) |
| LOC110520512 | col8a1 | coding | upstream | 494709 | 70810604 ~ 70837491 (-) |
| LOC118964322 | NA | coding | upstream | 580614 | 70896509 ~ 70907574 (-) |
| tmem30c | LOC106586702 | coding | upstream | 629139 | 70945034 ~ 70950599 (-) |
| G292295 | NA | non-coding | downstream | 4266 | 70311112 ~ 70311344 (-) |
| G292294 | NA | non-coding | downstream | 4598 | 70310735 ~ 70311012 (-) |
| G292286 | NA | non-coding | downstream | 18794 | 70296475 ~ 70296816 (-) |
| G292277 | NA | non-coding | downstream | 31422 | 70283656 ~ 70284188 (-) |
| G292272 | NA | non-coding | downstream | 63021 | 70243869 ~ 70252589 (-) |
| G292313 | NA | non-coding | upstream | 29632 | 70345527 ~ 70346693 (-) |
| G292317 | NA | non-coding | upstream | 43237 | 70359132 ~ 70359439 (-) |
| G292318 | NA | non-coding | upstream | 46176 | 70362071 ~ 70362333 (-) |
| G292321 | NA | non-coding | upstream | 61083 | 70376978 ~ 70377199 (-) |
| G292327 | NA | non-coding | upstream | 99997 | 70415892 ~ 70424806 (-) |
| G291977 | NA | other | downstream | 207660 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 319005 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 1059066 | 69256005 ~ 69256544 (-) |
| G290713 | LOC106586659 | other | downstream | 1464756 | 68846611 ~ 68850854 (-) |
| G290602 | NA | other | downstream | 1590696 | 68721808 ~ 68724914 (-) |
| G292753 | NA | other | upstream | 404141 | 70720036 ~ 70720591 (-) |
| G292919 | NA | other | upstream | 711724 | 71027619 ~ 71040152 (-) |
| G293984 | NA | other | upstream | 1587419 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 1857154 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 2255354 | 72571249 ~ 72575432 (-) |
