G292402 (LOC106586712)


Basic Information

Item Value
gene id G292402
gene name LOC106586712
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70508687 ~ 70514874 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU331584
cgagcgagagaggggaggccgagcgagcgagagaggggaggccgagcgagcgagagaggggaggccgagcgagcgagagaggggaggccgagcgagcgagagaggggaggccgagagagagagcgaggagacagagcgcgagagagagagagaggagagaggtagagagagtttgTCTCACCTCGTATCCGAGCCGTGCTGCTCTCTGTAACAACGTCTCTCCAGCATTTTTGTTGACGATTAGTCTTCGTGCCTCTGGGGGGATGGGCCGCACCACAGGAGGCTCAGCAGGGGGTGCCCTCCTCACCCCTGCTTTCTCCGGTGGGACAGTCCCACTGCCATTCACCTgggggggtagggagaggggCCCCGTTGCAGGGGAACAGGGCTTGACCGGAGAGCTGAGGTAATGTAGGGGAGAAGAGGGCCTTTTCCTTCGAGCACACTGCTCACTG

Function

NR:

description
BCL-6 corepressor-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU331584 True 455 lncRNA 0.63 2 70508687 70514874

Neighbor

gene id symbol gene type direction distance location
LOC118964359 NA coding downstream 288223 70220330 ~ 70220464 (-)
LOC110520496 LOC106586692 coding downstream 373155 70125298 ~ 70135532 (-)
LOC110520492 LOC106586689 coding downstream 460294 70035040 ~ 70048393 (-)
LOC110520490 LOC106586686 coding downstream 537514 69949665 ~ 69971173 (-)
piga LOC106586684 coding downstream 569831 69933697 ~ 69938856 (-)
LOC110520510 tfg coding upstream 256282 70771156 ~ 70806540 (-)
jagn1a LOC106586704 coding upstream 292475 70807349 ~ 70810049 (-)
LOC110520512 col8a1 coding upstream 295730 70810604 ~ 70837491 (-)
LOC118964322 NA coding upstream 381635 70896509 ~ 70907574 (-)
tmem30c LOC106586702 coding upstream 430160 70945034 ~ 70950599 (-)
G292371 NA non-coding downstream 49935 70458542 ~ 70458752 (-)
G292366 NA non-coding downstream 52788 70455401 ~ 70455899 (-)
G292327 NA non-coding downstream 83881 70415892 ~ 70424806 (-)
G292321 NA non-coding downstream 131488 70376978 ~ 70377199 (-)
G292318 NA non-coding downstream 146354 70362071 ~ 70362333 (-)
G292404 NA non-coding upstream 5351 70520225 ~ 70521267 (-)
G292384 NA non-coding upstream 40627 70555501 ~ 70564655 (-)
G292420 NA non-coding upstream 58305 70573179 ~ 70574259 (-)
G292669 NA non-coding upstream 64550 70579424 ~ 70581094 (-)
G292686 NA non-coding upstream 99086 70613960 ~ 70615548 (-)
G291977 NA other downstream 400737 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 512082 69980346 ~ 69996605 (-)
G291138 NA other downstream 1252143 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 1657833 68846611 ~ 68850854 (-)
G290602 NA other downstream 1783773 68721808 ~ 68724914 (-)
G292753 NA other upstream 205162 70720036 ~ 70720591 (-)
G292919 NA other upstream 512745 71027619 ~ 71040152 (-)
G293984 NA other upstream 1388440 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1658175 72121974 ~ 72206818 (-)
G294451 NA other upstream 2056375 72571249 ~ 72575432 (-)

Expression


Co-expression Network