Gene
RNA
| Item | Value |
|---|---|
| gene id | G292869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 70949397 ~ 70949788 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU332146 | False | 268 | lncRNA | 0.38 | 2 | 70949397 | 70949788 |
| TU332147 | False | 357 | lncRNA | 0.39 | 2 | 70949397 | 70949788 |
| TU332148 | True | 233 | lncRNA | 0.37 | 2 | 70949397 | 70949788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964322 | NA | coding | downstream | 41823 | 70896509 ~ 70907574 (-) |
| LOC110520512 | col8a1 | coding | downstream | 111906 | 70810604 ~ 70837491 (-) |
| jagn1a | LOC106586704 | coding | downstream | 139348 | 70807349 ~ 70810049 (-) |
| LOC110520510 | tfg | coding | downstream | 142857 | 70771156 ~ 70806540 (-) |
| LOC118964359 | NA | coding | downstream | 728933 | 70220330 ~ 70220464 (-) |
| cmss1 | cmss1 | coding | upstream | 893 | 70950681 ~ 71009719 (-) |
| LOC118964323 | NA | coding | upstream | 722671 | 71672459 ~ 71676171 (-) |
| LOC110520517 | LOC106586722 | coding | upstream | 758694 | 71708482 ~ 71716359 (-) |
| LOC110504652 | LOC106586714 | coding | upstream | 804491 | 71754279 ~ 71764744 (-) |
| rnaseh2b | rnaseh2b | coding | upstream | 824242 | 71774030 ~ 71785013 (-) |
| G292773 | NA | non-coding | downstream | 205275 | 70743342 ~ 70744122 (-) |
| G292686 | NA | non-coding | downstream | 333849 | 70613960 ~ 70615548 (-) |
| G292669 | NA | non-coding | downstream | 368303 | 70579424 ~ 70581094 (-) |
| G292420 | NA | non-coding | downstream | 375138 | 70573179 ~ 70574259 (-) |
| G292384 | NA | non-coding | downstream | 384742 | 70555501 ~ 70564655 (-) |
| G292927 | NA | non-coding | upstream | 91372 | 71041160 ~ 71041699 (-) |
| G292931 | NA | non-coding | upstream | 93852 | 71043640 ~ 71043881 (-) |
| G293042 | NA | non-coding | upstream | 212950 | 71162738 ~ 71172116 (-) |
| G293046 | NA | non-coding | upstream | 218469 | 71168257 ~ 71172419 (-) |
| G293043 | NA | non-coding | upstream | 220898 | 71170686 ~ 71174999 (-) |
| G292753 | NA | other | downstream | 228806 | 70720036 ~ 70720591 (-) |
| G291977 | NA | other | downstream | 841447 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 952792 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 1692853 | 69256005 ~ 69256544 (-) |
| G290713 | LOC106586659 | other | downstream | 2098543 | 68846611 ~ 68850854 (-) |
| G292919 | NA | other | upstream | 77831 | 71027619 ~ 71040152 (-) |
| G293984 | NA | other | upstream | 953526 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 1223261 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 1621461 | 72571249 ~ 72575432 (-) |
| G294697 | NA | other | upstream | 1825619 | 72775407 ~ 72776607 (-) |
