G293493


Basic Information

Item Value
gene id G293493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71300523 ~ 71301326 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU332830
gtttacctaatacctatATTTTACTTTAAaaatgcactgttggttagggcttgtaagtaagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctcttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctcttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctcttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtatcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctcttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcactgtgaggtctacacctgttgtattcagcatttcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU332830 True 804 lncRNA 0.42 1 71300523 71301326

Neighbor

gene id symbol gene type direction distance location
cmss1 cmss1 coding downstream 290804 70950681 ~ 71009719 (-)
tmem30c LOC106586702 coding downstream 349924 70945034 ~ 70950599 (-)
LOC118964322 NA coding downstream 392949 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 463032 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 490474 70807349 ~ 70810049 (-)
LOC118964323 NA coding upstream 371133 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 407156 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 452953 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 472704 71774030 ~ 71785013 (-)
trim13 LOC106586719 coding upstream 631095 71932421 ~ 71937033 (-)
G293486 NA non-coding downstream 19607 71280583 ~ 71280916 (-)
G293128 NA non-coding downstream 69144 71230804 ~ 71231379 (-)
G293127 NA non-coding downstream 69862 71230136 ~ 71230661 (-)
G293064 NA non-coding downstream 111154 71189033 ~ 71189369 (-)
G293043 NA non-coding downstream 125524 71170686 ~ 71174999 (-)
G293495 NA non-coding upstream 1748 71303074 ~ 71303688 (-)
G293502 NA non-coding upstream 19169 71320495 ~ 71320723 (-)
G293511 NA non-coding upstream 47507 71348833 ~ 71349318 (-)
G293514 NA non-coding upstream 54998 71356324 ~ 71356834 (-)
G293518 NA non-coding upstream 59843 71361169 ~ 71361400 (-)
G292919 NA other downstream 260371 71027619 ~ 71040152 (-)
G292753 NA other downstream 579932 70720036 ~ 70720591 (-)
G291977 NA other downstream 1192573 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1303918 69980346 ~ 69996605 (-)
G291138 NA other downstream 2043979 69256005 ~ 69256544 (-)
G293984 NA other upstream 601988 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 871723 72121974 ~ 72206818 (-)
G294451 NA other upstream 1269923 72571249 ~ 72575432 (-)
G294697 NA other upstream 1474081 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 1575013 72870852 ~ 72881264 (-)

Expression


Co-expression Network