G293570



Basic Information


Item Value
gene id G293570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71483977 ~ 71484521 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU332927
CAAATATACTAGGCAGACATGCAGAGAGGATGTGAGAGCTTTAGCTATCAACCTCTACACTGACACAAAAAGACTGCGAAAGATGGACTGTGAAAGAGAAAAAGTGCTACACTATGTTACATTTAACACtttgtttacctctctctctctgtctctctgtctctttctgtctctctctgtctcgctctgtctctctctgtctctctctctctctctttgtctctctctctctctctctctctctctctctctctctctgtctctatctgtctctgtctgtctgtctctctctctctccctctctctctctctctctctctgtctctatctgtctctgtc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU332927 True 339 lncRNA 0.45 2 71483977 71484521

Neighbor


gene id symbol gene type direction distance location
cmss1 cmss1 coding downstream 474258 70950681 ~ 71009719 (-)
tmem30c LOC106586702 coding downstream 533378 70945034 ~ 70950599 (-)
LOC118964322 NA coding downstream 576403 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 646486 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 673928 70807349 ~ 70810049 (-)
LOC118964323 NA coding upstream 187938 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 223961 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 269758 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 289509 71774030 ~ 71785013 (-)
trim13 LOC106586719 coding upstream 447900 71932421 ~ 71937033 (-)
G293555 NA non-coding downstream 28560 71454474 ~ 71455417 (-)
G293553 NA non-coding downstream 34907 71448166 ~ 71449070 (-)
G293528 NA non-coding downstream 104123 71379222 ~ 71379854 (-)
G293518 NA non-coding downstream 122577 71361169 ~ 71361400 (-)
G293514 NA non-coding downstream 127143 71356324 ~ 71356834 (-)
G293583 NA non-coding upstream 19364 71503885 ~ 71504279 (-)
G293596 NA non-coding upstream 41101 71525622 ~ 71525911 (-)
G293600 NA non-coding upstream 45747 71530268 ~ 71530485 (-)
G293601 NA non-coding upstream 46531 71531052 ~ 71531452 (-)
G293602 NA non-coding upstream 47300 71531821 ~ 71532070 (-)
G292919 NA other downstream 443825 71027619 ~ 71040152 (-)
G292753 NA other downstream 763386 70720036 ~ 70720591 (-)
G291977 NA other downstream 1376027 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1487372 69980346 ~ 69996605 (-)
G291138 NA other downstream 2227433 69256005 ~ 69256544 (-)
G293984 NA other upstream 418793 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 688528 72121974 ~ 72206818 (-)
G294451 NA other upstream 1086728 72571249 ~ 72575432 (-)
G294697 NA other upstream 1290886 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 1391818 72870852 ~ 72881264 (-)

Expression



Co-expression Network