G293600



Basic Information


Item Value
gene id G293600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71530268 ~ 71530485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU332960
CTGCCATACCCCCATAATCTCCCTGTGCTCTCTACTGCTGATTACACTATTGACGTATCGACAAGCTGAGAGTGGTGTTGCATAGTCTGCTGTgggctctctcattctctctctcagcttTGAACcgatctctttctccttctcattTTCTGCTCTTTCTTTATGtcccctgtgtgtatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU332960 True 218 lncRNA 0.47 1 71530268 71530485

Neighbor


gene id symbol gene type direction distance location
cmss1 cmss1 coding downstream 520549 70950681 ~ 71009719 (-)
tmem30c LOC106586702 coding downstream 579669 70945034 ~ 70950599 (-)
LOC118964322 NA coding downstream 622694 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 692777 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 720219 70807349 ~ 70810049 (-)
LOC118964323 NA coding upstream 141974 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 177997 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 223794 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 243545 71774030 ~ 71785013 (-)
trim13 LOC106586719 coding upstream 401936 71932421 ~ 71937033 (-)
G293596 NA non-coding downstream 4357 71525622 ~ 71525911 (-)
G293583 NA non-coding downstream 25989 71503885 ~ 71504279 (-)
G293570 NA non-coding downstream 45747 71483977 ~ 71484521 (-)
G293555 NA non-coding downstream 74851 71454474 ~ 71455417 (-)
G293553 NA non-coding downstream 81198 71448166 ~ 71449070 (-)
G293601 NA non-coding upstream 567 71531052 ~ 71531452 (-)
G293602 NA non-coding upstream 1336 71531821 ~ 71532070 (-)
G293606 NA non-coding upstream 4969 71535454 ~ 71535655 (-)
G293645 NA non-coding upstream 74098 71604583 ~ 71605239 (-)
G293680 NA non-coding upstream 124215 71654700 ~ 71654982 (-)
G292919 NA other downstream 490116 71027619 ~ 71040152 (-)
G292753 NA other downstream 809677 70720036 ~ 70720591 (-)
G291977 NA other downstream 1422318 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1533663 69980346 ~ 69996605 (-)
G291138 NA other downstream 2273724 69256005 ~ 69256544 (-)
G293984 NA other upstream 372829 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 642564 72121974 ~ 72206818 (-)
G294451 NA other upstream 1040764 72571249 ~ 72575432 (-)
G294697 NA other upstream 1244922 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 1345854 72870852 ~ 72881264 (-)

Expression



Co-expression Network