G293606



Basic Information


Item Value
gene id G293606
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71535454 ~ 71535655 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU332966
atacattgttggaaaaggacctgtaagtaagcatttcactggtaGTCTATATcagttgtttacgaagcatgtgacaaatacaatttgatttgataggtcTTAATGAAGCCTTCATACAACTGTAATAAAGTCCACATAATAACTTAACTTCTTGATGAAAAAACTCACAACTTAATTAAGCATTCATAAGTTACAGCTAGTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU332966 True 202 lncRNA 0.31 1 71535454 71535655

Neighbor


gene id symbol gene type direction distance location
cmss1 cmss1 coding downstream 525735 70950681 ~ 71009719 (-)
tmem30c LOC106586702 coding downstream 584855 70945034 ~ 70950599 (-)
LOC118964322 NA coding downstream 627880 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 697963 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 725405 70807349 ~ 70810049 (-)
LOC118964323 NA coding upstream 136804 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 172827 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 218624 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 238375 71774030 ~ 71785013 (-)
trim13 LOC106586719 coding upstream 396766 71932421 ~ 71937033 (-)
G293602 NA non-coding downstream 3384 71531821 ~ 71532070 (-)
G293601 NA non-coding downstream 4002 71531052 ~ 71531452 (-)
G293600 NA non-coding downstream 4969 71530268 ~ 71530485 (-)
G293596 NA non-coding downstream 9543 71525622 ~ 71525911 (-)
G293583 NA non-coding downstream 31175 71503885 ~ 71504279 (-)
G293645 NA non-coding upstream 68928 71604583 ~ 71605239 (-)
G293680 NA non-coding upstream 119045 71654700 ~ 71654982 (-)
G293681 NA non-coding upstream 120768 71656423 ~ 71656833 (-)
G293685 NA non-coding upstream 123690 71659345 ~ 71659633 (-)
G293691 NA non-coding upstream 133454 71669109 ~ 71669337 (-)
G292919 NA other downstream 495302 71027619 ~ 71040152 (-)
G292753 NA other downstream 814863 70720036 ~ 70720591 (-)
G291977 NA other downstream 1427504 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1538849 69980346 ~ 69996605 (-)
G291138 NA other downstream 2278910 69256005 ~ 69256544 (-)
G293984 NA other upstream 367659 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 637394 72121974 ~ 72206818 (-)
G294451 NA other upstream 1035594 72571249 ~ 72575432 (-)
G294697 NA other upstream 1239752 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 1340684 72870852 ~ 72881264 (-)

Expression



Co-expression Network