Gene
RNA
| Item | Value |
|---|---|
| gene id | G293729 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 71738279 ~ 71738586 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LINE-1 reverse transcriptase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU333104 | True | 308 | lncRNA | 0.41 | 1 | 71738279 | 71738586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520517 | LOC106586722 | coding | downstream | 21920 | 71708482 ~ 71716359 (-) |
| LOC118964323 | NA | coding | downstream | 62108 | 71672459 ~ 71676171 (-) |
| cmss1 | cmss1 | coding | downstream | 728560 | 70950681 ~ 71009719 (-) |
| tmem30c | LOC106586702 | coding | downstream | 787680 | 70945034 ~ 70950599 (-) |
| LOC118964322 | NA | coding | downstream | 830705 | 70896509 ~ 70907574 (-) |
| LOC110504652 | LOC106586714 | coding | upstream | 15693 | 71754279 ~ 71764744 (-) |
| rnaseh2b | rnaseh2b | coding | upstream | 35444 | 71774030 ~ 71785013 (-) |
| trim13 | LOC106586719 | coding | upstream | 193835 | 71932421 ~ 71937033 (-) |
| LOC110505427 | LOC106586716 | coding | upstream | 239227 | 71977813 ~ 71979314 (-) |
| LOC110520524 | NA | coding | upstream | 247734 | 71986320 ~ 71996884 (-) |
| G293725 | NA | non-coding | downstream | 6483 | 71731579 ~ 71731796 (-) |
| G293691 | NA | non-coding | downstream | 68942 | 71669109 ~ 71669337 (-) |
| G293685 | NA | non-coding | downstream | 78646 | 71659345 ~ 71659633 (-) |
| G293681 | NA | non-coding | downstream | 81446 | 71656423 ~ 71656833 (-) |
| G293731 | NA | non-coding | upstream | 948 | 71739534 ~ 71740039 (-) |
| G293738 | NA | non-coding | upstream | 12804 | 71751390 ~ 71751794 (-) |
| G293739 | NA | non-coding | upstream | 13326 | 71751912 ~ 71752323 (-) |
| G293747 | NA | non-coding | upstream | 46864 | 71785450 ~ 71785848 (-) |
| G293755 | NA | non-coding | upstream | 63383 | 71801969 ~ 71802295 (-) |
| G292919 | NA | other | downstream | 698127 | 71027619 ~ 71040152 (-) |
| G292753 | NA | other | downstream | 1017688 | 70720036 ~ 70720591 (-) |
| G291977 | NA | other | downstream | 1630329 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 1741674 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 2481735 | 69256005 ~ 69256544 (-) |
| G293984 | NA | other | upstream | 164728 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 434463 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 832663 | 72571249 ~ 72575432 (-) |
| G294697 | NA | other | upstream | 1036821 | 72775407 ~ 72776607 (-) |
| LOC110520539 | mfsd9 | other | upstream | 1137753 | 72870852 ~ 72881264 (-) |
