G293452


Basic Information

Item Value
gene id G293452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71739527 ~ 71740082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU332786
cccatctagactgcacaagttcaacccagatatctcctccctatgttttagatgtggctcagatgaaggaacattcctccattccacttggcagtgttcaaaactacacggtttctggcagggggtatgcgataccatatcctcaattcacggggttgcattccctttagacccggaggtctgtctactgggtaactttactaacaccaatcttaggcaaagccatactataaagctaacagaaatattgctagcgaatgccaagaaatgtattgccttgaaatggaaattggattcctccctgccagttgcaatgtggctatcggaagttaatagttgtatccctttggagaaaatcacttactgcttgaggaataagttaaagacattttacagaatttggcaaccttttattgactatatggagaatctccccccacatctcATTGATTGAATCTATATTTAATCCTCACATAATGTTTCACAcgtaatgtataatatgtagccTACGGCAGGTGATCCAATGTCTTGTTAGAATTTTTTTCTTattgtatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU332786 True 556 lncRNA 0.40 1 71739527 71740082

Neighbor

gene id symbol gene type direction distance location
il1rapl1a LOC106586724 coding upstream 32841 71280049 ~ 71706686 (+)
LOC110520513 LOC106586698 coding upstream 737235 70962179 ~ 71002292 (+)
LOC110520514 dcbld2 coding upstream 794877 70909357 ~ 70944650 (+)
LOC110520508 abi3bp coding upstream 970020 70711131 ~ 70769507 (+)
LOC110504631 LOC106582154 coding upstream 1083646 70612151 ~ 70655881 (+)
LOC118964324 NA coding downstream 67973 71808055 ~ 71810394 (+)
LOC110520521 LOC106586720 coding downstream 188274 71928356 ~ 71944540 (+)
LOC110520522 LOC106586718 coding downstream 207285 71947367 ~ 71975611 (+)
LOC110520528 NA coding downstream 263463 72003545 ~ 72008381 (+)
LOC110504668 LOC106586734 coding downstream 824532 72564614 ~ 72603217 (+)
G293448 NA non-coding upstream 5346 71733914 ~ 71734181 (+)
G293433 LOC106586722 non-coding upstream 28068 71710828 ~ 71711459 (+)
G293431 NA non-coding upstream 29423 71708499 ~ 71710104 (+)
G293405 NA non-coding upstream 69380 71669941 ~ 71670147 (+)
G293400 NA non-coding upstream 74279 71664877 ~ 71665248 (+)
G293453 NA non-coding downstream 765 71740847 ~ 71741052 (+)
G293461 NA non-coding downstream 15577 71755659 ~ 71774570 (+)
G293462 rnaseh2b non-coding downstream 38717 71778799 ~ 71785057 (+)
G293474 NA non-coding downstream 50071 71790153 ~ 71790390 (+)
G293475 NA non-coding downstream 52249 71792331 ~ 71792713 (+)
G293450 NA other upstream 1352 71737805 ~ 71738175 (+)
G293204 NA other upstream 373104 71366183 ~ 71366423 (+)
LOC110520507 senp7 other upstream 1158438 70576887 ~ 70597458 (+)
LOC110520493 LOC106586690 other upstream 1669170 70057383 ~ 70070470 (+)
G294147 NA other downstream 508878 72248960 ~ 72249987 (+)
G294162 NA other downstream 550266 72290348 ~ 72292583 (+)
G294772 NA other downstream 1159186 72899268 ~ 72899634 (+)
c3h2orf49 cssa25h2orf49 other downstream 1278753 73018800 ~ 73022950 (+)

Expression


Co-expression Network