Gene
RNA
| Item | Value |
|---|---|
| gene id | G293461 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 71755659 ~ 71774570 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU332796 | False | 426 | lncRNA | 0.52 | 3 | 71755659 | 71774570 |
| TU332795 | True | 374 | lncRNA | 0.51 | 2 | 71774042 | 71774570 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il1rapl1a | LOC106586724 | coding | upstream | 48973 | 71280049 ~ 71706686 (+) |
| LOC110520513 | LOC106586698 | coding | upstream | 753367 | 70962179 ~ 71002292 (+) |
| LOC110520514 | dcbld2 | coding | upstream | 811009 | 70909357 ~ 70944650 (+) |
| LOC110520508 | abi3bp | coding | upstream | 986152 | 70711131 ~ 70769507 (+) |
| LOC110504631 | LOC106582154 | coding | upstream | 1099778 | 70612151 ~ 70655881 (+) |
| LOC118964324 | NA | coding | downstream | 33485 | 71808055 ~ 71810394 (+) |
| LOC110520521 | LOC106586720 | coding | downstream | 153786 | 71928356 ~ 71944540 (+) |
| LOC110520522 | LOC106586718 | coding | downstream | 172797 | 71947367 ~ 71975611 (+) |
| LOC110520528 | NA | coding | downstream | 228975 | 72003545 ~ 72008381 (+) |
| LOC110504668 | LOC106586734 | coding | downstream | 790044 | 72564614 ~ 72603217 (+) |
| G293453 | NA | non-coding | upstream | 14607 | 71740847 ~ 71741052 (+) |
| G293452 | NA | non-coding | upstream | 15577 | 71739527 ~ 71740082 (+) |
| G293448 | NA | non-coding | upstream | 21478 | 71733914 ~ 71734181 (+) |
| G293433 | LOC106586722 | non-coding | upstream | 44200 | 71710828 ~ 71711459 (+) |
| G293431 | NA | non-coding | upstream | 45555 | 71708499 ~ 71710104 (+) |
| G293462 | rnaseh2b | non-coding | downstream | 4229 | 71778799 ~ 71785057 (+) |
| G293474 | NA | non-coding | downstream | 15583 | 71790153 ~ 71790390 (+) |
| G293475 | NA | non-coding | downstream | 17761 | 71792331 ~ 71792713 (+) |
| G293783 | NA | non-coding | downstream | 60787 | 71835357 ~ 71835599 (+) |
| G293450 | NA | other | upstream | 17484 | 71737805 ~ 71738175 (+) |
| G293204 | NA | other | upstream | 389236 | 71366183 ~ 71366423 (+) |
| LOC110520507 | senp7 | other | upstream | 1174570 | 70576887 ~ 70597458 (+) |
| LOC110520493 | LOC106586690 | other | upstream | 1685302 | 70057383 ~ 70070470 (+) |
| G294147 | NA | other | downstream | 474390 | 72248960 ~ 72249987 (+) |
| G294162 | NA | other | downstream | 515778 | 72290348 ~ 72292583 (+) |
| G294772 | NA | other | downstream | 1124698 | 72899268 ~ 72899634 (+) |
| c3h2orf49 | cssa25h2orf49 | other | downstream | 1244265 | 73018800 ~ 73022950 (+) |
