G293828



Basic Information


Item Value
gene id G293828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71900416 ~ 71900646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU333208
CGCCTGCTCATGTCGAATTGGCTCACCTTTAAAATGCATGGATGCAGATAGAACGTTTTGGCCCATCCCATGAACCCTTAGTTATCGTGGTCAAAATGAAGTCTGAAATAATAATTCCTTACTCAGGAATTTCCTATAGGCCTAACCTAACTTTGTTTGTTAAGAAACAATCGCTGAAAATCATCATCAGACTAAGCATATGTCTTATCAAGATTCTATGTGAATAAGCAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU333208 True 231 lncRNA 0.38 1 71900416 71900646

Neighbor


gene id symbol gene type direction distance location
rnaseh2b rnaseh2b coding downstream 115403 71774030 ~ 71785013 (-)
LOC110504652 LOC106586714 coding downstream 135672 71754279 ~ 71764744 (-)
LOC110520517 LOC106586722 coding downstream 184057 71708482 ~ 71716359 (-)
LOC118964323 NA coding downstream 224245 71672459 ~ 71676171 (-)
cmss1 cmss1 coding downstream 890697 70950681 ~ 71009719 (-)
trim13 LOC106586719 coding upstream 31775 71932421 ~ 71937033 (-)
LOC110505427 LOC106586716 coding upstream 77167 71977813 ~ 71979314 (-)
LOC110520524 NA coding upstream 85674 71986320 ~ 71996884 (-)
LOC110520527 LOC106586729 coding upstream 96708 71997354 ~ 72005789 (-)
LOC110520523 LOC106582019 coding upstream 110049 72010695 ~ 72114513 (-)
G293822 NA non-coding downstream 35191 71861471 ~ 71865225 (-)
G293818 NA non-coding downstream 42950 71857263 ~ 71857466 (-)
G293755 NA non-coding downstream 98121 71801969 ~ 71802295 (-)
G293747 NA non-coding downstream 114568 71785450 ~ 71785848 (-)
G293739 NA non-coding downstream 148093 71751912 ~ 71752323 (-)
G294001 NA non-coding upstream 5388 71906034 ~ 71906494 (-)
G294002 NA non-coding upstream 6395 71907041 ~ 71907424 (-)
G294006 NA non-coding upstream 9663 71910309 ~ 71910544 (-)
G294008 NA non-coding upstream 14287 71914933 ~ 71915167 (-)
G294011 NA non-coding upstream 23418 71924064 ~ 71924299 (-)
G292919 NA other downstream 860264 71027619 ~ 71040152 (-)
G292753 NA other downstream 1179825 70720036 ~ 70720591 (-)
G291977 NA other downstream 1792466 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1903811 69980346 ~ 69996605 (-)
G291138 NA other downstream 2643872 69256005 ~ 69256544 (-)
G293984 NA other upstream 2668 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 272403 72121974 ~ 72206818 (-)
G294451 NA other upstream 670603 72571249 ~ 72575432 (-)
G294697 NA other upstream 874761 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 975693 72870852 ~ 72881264 (-)

Expression



Co-expression Network