G294002



Basic Information


Item Value
gene id G294002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71907041 ~ 71907424 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU333438
ctcctgatgtcacaggaaggcaaaaaatatcattaaggacaataaccacccgaggcactgcctgttcaccccacttccatccagaaggcgaggtcagtacaggtggatcaaagctgggacagagagattgaaaaacagcttctatctcaaggccatcagattgttaaacagccatcactagcacagacgggcggctgcctacctacagacttgatatcattggccactttaataaatggaacactagtcactttaataatgccgctttaagaatgtttacatatctcacattactcatctcatatgtatatactgtatactgcatcctacactatatattatatacaaattccacaacaaaacctaatacacacaatctagaaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU333438 True 384 lncRNA 0.40 1 71907041 71907424

Neighbor


gene id symbol gene type direction distance location
rnaseh2b rnaseh2b coding downstream 122028 71774030 ~ 71785013 (-)
LOC110504652 LOC106586714 coding downstream 142297 71754279 ~ 71764744 (-)
LOC110520517 LOC106586722 coding downstream 190682 71708482 ~ 71716359 (-)
LOC118964323 NA coding downstream 230870 71672459 ~ 71676171 (-)
cmss1 cmss1 coding downstream 897322 70950681 ~ 71009719 (-)
trim13 LOC106586719 coding upstream 24997 71932421 ~ 71937033 (-)
LOC110505427 LOC106586716 coding upstream 70389 71977813 ~ 71979314 (-)
LOC110520524 NA coding upstream 78896 71986320 ~ 71996884 (-)
LOC110520527 LOC106586729 coding upstream 89930 71997354 ~ 72005789 (-)
LOC110520523 LOC106582019 coding upstream 103271 72010695 ~ 72114513 (-)
G294001 NA non-coding downstream 547 71906034 ~ 71906494 (-)
G293828 NA non-coding downstream 6395 71900416 ~ 71900646 (-)
G293822 NA non-coding downstream 41816 71861471 ~ 71865225 (-)
G293818 NA non-coding downstream 49575 71857263 ~ 71857466 (-)
G293755 NA non-coding downstream 104746 71801969 ~ 71802295 (-)
G294006 NA non-coding upstream 2885 71910309 ~ 71910544 (-)
G294008 NA non-coding upstream 7509 71914933 ~ 71915167 (-)
G294011 NA non-coding upstream 16640 71924064 ~ 71924299 (-)
G294012 NA non-coding upstream 17653 71925077 ~ 71925290 (-)
G293990 NA non-coding upstream 18641 71926065 ~ 71944532 (-)
G293984 NA other downstream 3133 71903314 ~ 71903908 (-)
G292919 NA other downstream 866889 71027619 ~ 71040152 (-)
G292753 NA other downstream 1186450 70720036 ~ 70720591 (-)
G291977 NA other downstream 1799091 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1910436 69980346 ~ 69996605 (-)
LOC110504660 LOC106582021 other upstream 265625 72121974 ~ 72206818 (-)
G294451 NA other upstream 663825 72571249 ~ 72575432 (-)
G294697 NA other upstream 867983 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 968915 72870852 ~ 72881264 (-)
G296011 NA other upstream 1664868 73572292 ~ 73572911 (-)

Expression



Co-expression Network