G294198


Basic Information

Item Value
gene id G294198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72250813 ~ 72271706 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU333672
TGGGTTTAGGACGGCGTtaagaggagggggaaggaatCTTCTCATACTTCACTGGCTACGATATGAGGGACGACCAGGGAGACTTGCCTCAATTTGCATAACCTCGGCTGTTTTACACACAAGGAGggtgtccAGTATGAGGACTGTCATGAGGGACTGTCCATGAATCACCATGGAAACCTGTGATTGACAGACAGGCGCTAGCCCcatctggctggctggcaggccgTCATTACGATGAGCAGGAGATTTGCTGTACGGCGACAGGACCGTACGAAAAATGTCAACGATCGCCAGAGCCCCAGATTTCCTCCCATCCCCCAAGTAGCTAATGTTACCTAATGTTATCTCATGTTATCTAATGCCCATATTTATCATTCAAATAATCTAGACTGAAGTTAGCTGCAATACACCCCCACACCTCACTGACTCCCCTTATGTACCAACACCTCAACACACCTCACTGACTCCCCTTATGTACCAACACCTCAACACACCTCACTGACTCCCCTTATGTACCAACACCTCAACACACCTCACTGACTCCCCTTATGTACCAACACCTCAAACCACCTCACTGACTCCCCTTATGTACCAACACCTCAACACACCTCACTGACTCCCCTTATTTACCAACACCTCAACACACCTCACTGACTCCCCATATGTACCAACACCTCAACACACCTCACTCAAACCCCCTTACACTTTCCCCATGTACCTCATCCCAACCACTTTGGAACATACCCATCCTCCAACCTGTCTGTCACTAATCACTCCCTACACTCCTCACCCCAACCGTCCCTCACACCACCCACCCCCTCCTTACCCCCACACACCTTAGCCTGCCTCCTATGTAAATACCCTGTCTCCCTCTATTGGCCTATGTCTCAGCAGCGCTCTGCATGTTAACATTTCTAAACCCCCTCAAATTGTGACTAACAAACATTTTGTAGCCTTCAGTCTATTTGAACAGTCAGCCAGCCCTGCATGCCAAACAGCTAGCTAgaacagactgagacagactggaAGACTGGCACCCTGACCAGAGAGTAAGTGCTGTGTTTATCCTCTCATACATACACCACCAGCTTACTCCGGTTTGGCAGGGCAGTTACAAAGGACCAGCCAATGCCTGGCAAACTGACAGGCATCCGGGCTAGTTAGCACCTAGGAAGAGGTTCTATAAAGATAAAGGAGAAAAGACAAGCAATGTGtactcatccttctcctctccagtgaAGTCTTACcactcatccttctcctctccagtgaAGTCTTACCACTCATCCTTCACCTCTCCAGTGAAGTCTTACCACTCATCGTTCTCCACTCCAGTGAAGTCTTACcactcatccttctcctctccagtgaAGTCTTACcactcatccttctcctctccagtgaAGTCTTACcactcatccttctcctctccagtgaAGTCTTACCACTCATCATTCTCCTCTCCAGTGAAGTCTTACcactcatccttctcctctccagt

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU333672 True 1504 lncRNA 0.49 3 72250813 72271706

Neighbor

gene id symbol gene type direction distance location
LOC110504660 LOC106582021 coding downstream 43995 72121974 ~ 72206818 (-)
LOC110520523 LOC106582019 coding downstream 136300 72010695 ~ 72114513 (-)
LOC110520527 LOC106586729 coding downstream 245024 71997354 ~ 72005789 (-)
LOC110520524 NA coding downstream 253929 71986320 ~ 71996884 (-)
LOC110505427 LOC106586716 coding downstream 271499 71977813 ~ 71979314 (-)
LOC110520531 LOC106582025 coding upstream 219142 72490848 ~ 72542128 (-)
LOC110504707 NA coding upstream 505010 72776716 ~ 72782874 (-)
LOC110504714 LOC106586779 coding upstream 519598 72791304 ~ 72838453 (-)
LOC110520539 mfsd9 coding upstream 599146 72870852 ~ 72881264 (-)
fhl2a fhl2 coding upstream 753582 73025288 ~ 73039384 (-)
G294143 NA non-coding downstream 7304 72238098 ~ 72243509 (-)
G294126 NA non-coding downstream 25514 72225057 ~ 72225299 (-)
G294099 NA non-coding downstream 78331 72172079 ~ 72172482 (-)
G294097 NA non-coding downstream 80780 72169702 ~ 72170033 (-)
G294096 NA non-coding downstream 84476 72166106 ~ 72166337 (-)
G294209 NA non-coding upstream 12103 72283809 ~ 72284009 (-)
G294217 NA non-coding upstream 38395 72310101 ~ 72310991 (-)
G294232 NA non-coding upstream 72489 72344195 ~ 72344445 (-)
G294248 NA non-coding upstream 116284 72387990 ~ 72388223 (-)
G294256 NA non-coding upstream 120800 72392506 ~ 72392841 (-)
G293984 NA other downstream 346905 71903314 ~ 71903908 (-)
G292919 NA other downstream 1210661 71027619 ~ 71040152 (-)
G292753 NA other downstream 1530222 70720036 ~ 70720591 (-)
G291977 NA other downstream 2142863 70107540 ~ 70107950 (-)
G294451 NA other upstream 299543 72571249 ~ 72575432 (-)
G294697 NA other upstream 503701 72775407 ~ 72776607 (-)
G296011 NA other upstream 1300586 73572292 ~ 73572911 (-)
G296043 NA other upstream 1360332 73632038 ~ 73633036 (-)

Expression


Co-expression Network