G295753


Basic Information

Item Value
gene id G295753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 72964648 ~ 72965770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335515
acttaatgcttgtagatgtaggcctacttaatgcTTGGAGATGTAGGTCTACTAAATGCTTgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgtttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcTTGTTTGTAGATGTAGGCTTACTTAATGCTTgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcTTGTTTGTAGATGTAGGCTTACTTAAGGCTTGgagatgtaggcctacttaatgcTTGTAGATGTAGGTCTACTAAATACTTGTAGATGTAGGACTACTTAATACTTgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatacttgtagatgtaggcctacttaatgcTTGTAGATGTAGGACTACTTAATACTTgtagatgtaggcctacttaatgcttgtagatgtaggcctacttaatgcttgtagatgtaggcctactaaatgcttgtagatgtaggcctacttaatgcttggagatgtaggcctacttaagGCTTGgagatgtaggcctacttaatgcttgtaaatgtaggcctacttaaggcttgtagatgtaggcctacttaaggcttgtagatgtaggcctacttaaggcttgtagatgtaggcctacttaagGCTTGTAGATGTAGTCCTACTTAATGCTTgtagatgtaggcctacttaatacttgtagatgtaggcctacttaatgcttgtagatgtaggcctactaaatgcttgtagatgtaggcctact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335515 True 1048 lncRNA 0.39 2 72964648 72965770

Neighbor

gene id symbol gene type direction distance location
LOC110520539 mfsd9 coding downstream 83384 72870852 ~ 72881264 (-)
LOC110504714 LOC106586779 coding downstream 126195 72791304 ~ 72838453 (-)
LOC110504707 NA coding downstream 181774 72776716 ~ 72782874 (-)
LOC110520531 LOC106582025 coding downstream 422520 72490848 ~ 72542128 (-)
LOC110520529 LOC106586732 coding downstream 697998 72264378 ~ 72266650 (-)
fhl2a fhl2 coding upstream 59518 73025288 ~ 73039384 (-)
uxs1 uxs1 coding upstream 196746 73162516 ~ 73266610 (-)
st6gal2a st6gal2 coding upstream 372400 73338170 ~ 73505121 (-)
LOC110505436 LOC106581976 coding upstream 581429 73547199 ~ 73561315 (-)
grk1a grk1 coding upstream 626014 73591784 ~ 73597306 (-)
G295750 NA non-coding downstream 1974 72962307 ~ 72962674 (-)
G294763 NA non-coding downstream 71377 72893018 ~ 72893271 (-)
G294762 NA non-coding downstream 72111 72892337 ~ 72892537 (-)
G294760 NA non-coding downstream 77009 72885029 ~ 72887639 (-)
G295785 NA non-coding upstream 80844 73046614 ~ 73049200 (-)
G295797 nck2 non-coding upstream 102978 73068748 ~ 73099306 (-)
G295823 NA non-coding upstream 154895 73120665 ~ 73123169 (-)
G295832 NA non-coding upstream 167704 73133474 ~ 73139783 (-)
G295865 NA non-coding upstream 251173 73216943 ~ 73217812 (-)
G294697 NA other downstream 188041 72775407 ~ 72776607 (-)
G294451 NA other downstream 389216 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 757850 72121974 ~ 72206818 (-)
G293984 NA other downstream 1060740 71903314 ~ 71903908 (-)
G296011 NA other upstream 606522 73572292 ~ 73572911 (-)
G296043 NA other upstream 666268 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 807384 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 842712 73808482 ~ 73809596 (-)
LOC110520572 cep97 other upstream 907203 73870489 ~ 73877576 (-)

Expression


Co-expression Network